CpG interval report generated on 16/07/20 with pycoMeth 0.4.14

Interval details
pvalue rank chromosome start end length number of samples number of CpGs adjusted pvalue
#34 14 19955750 19956691 941 11 29 6.27392e-32
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
distance to tss transcript id gene id transcript name chromosome start end strand feature type transcript biotype
14624 ensorlt00000031151 sorlg00000029603 rps6ka4-202 14 19957802 19971315 - mRNA protein_coding
17116 ensorlt00000044933 sorlg00000029603 rps6ka4-201 14 19957802 19973807 - mRNA protein_coding
17134 ensorlt00000031900 sorlg00000029603 rps6ka4-203 14 19962524 19973825 - mRNA protein_coding
30221 ensorlt00000013613 sorlg00000010852 stip1-202 14 19978576 19986912 - mRNA protein_coding
33115 ensorlt00000013614 sorlg00000010852 stip1-201 14 19978513 19989806 - mRNA protein_coding
33997 ensorlt00000038874 sorlg00000025822 spata22-201 14 19990688 19998823 + mRNA protein_coding
33997 ensorlt00000043058 sorlg00000025822 spata22-202 14 19990688 19998823 + mRNA protein_coding

Source file: /home/aleg/Programming/Packages/pycoMeth/docs/Comp_Report/data/Medaka_CGI_meth_comp.tsv.gz

MD5 hash: f93dda71505ee953374fab70e1ac5c37