CpG interval report generated on 16/07/20 with pycoMeth 0.4.14

Interval details
pvalue rank chromosome start end length number of samples number of CpGs adjusted pvalue
#11 2 3660038 3660922 884 12 28 1.8143e-41
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
distance to tss transcript id gene id transcript name chromosome start end strand feature type transcript biotype
1339 ensorlt00000030756 sorlg00000026726 2 3660061 3662261 - mRNA protein_coding
32942 ensorlt00000000163 sorlg00000000133 sh3bp4a-201 2 3663771 3693864 - mRNA protein_coding
-34679 ensorlt00000000160 sorlg00000000125 aox1-201 2 3599881 3625359 - mRNA protein_coding
55847 ensorlt00000042213 sorlg00000028907 s100b-201 2 3716769 3719712 + mRNA protein_coding
-65095 ensorlt00000043576 sorlg00000000117 bzw1b-201 2 3582386 3594943 - mRNA protein_coding
96711 ensorlt00000000166 sorlg00000000135 ahr2-201 2 3757633 3807339 + mRNA protein_coding
-98231 ensorlt00000000142 sorlg00000000115 2 3561807 3575638 + mRNA protein_coding

Source file: /home/aleg/Programming/Packages/pycoMeth/docs/Comp_Report/data/Medaka_CGI_meth_comp.tsv.gz

MD5 hash: f93dda71505ee953374fab70e1ac5c37