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CpG interval report generated on 16/07/20 with pycoMeth 0.4.14
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | adjusted pvalue |
|---|---|---|---|---|---|---|---|
| #7 | 2 | 23361417 | 23362425 | 1008 | 11 | 36 | 2.34662e-44 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| -38910 | ensorlt00000007888 | sorlg00000006275 | gart-201 | 2 | 23313034 | 23322507 | - | mRNA | protein_coding |
| -68893 | ensorlt00000032912 | sorlg00000028237 | 2 | 23291361 | 23292524 | - | mRNA | protein_coding | |
| -71227 | ensorlt00000007813 | sorlg00000006216 | 2 | 23286187 | 23290190 | - | mRNA | protein_coding | |
| -78198 | ensorlt00000007807 | sorlg00000006210 | 2 | 23270364 | 23283219 | - | mRNA | protein_coding |
Source file: /home/aleg/Programming/Packages/pycoMeth/docs/Comp_Report/data/Medaka_CGI_meth_comp.tsv.gz
MD5 hash: f93dda71505ee953374fab70e1ac5c37