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CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #174 | 14 | 73718430 | 73719600 | 1170 | 3 | 37 | 1.25827e-14 | 7.19166e-13 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| 2024 | enst00000478847 | sg00000156030 | elmsan1-209 | 14 | 73719370 | 73721624 | - | lnc_RNA | retained_intron |
| -4046 | enst00000316836 | sg00000176903 | pnma1-201 | 14 | 73711783 | 73714384 | - | mRNA | protein_coding |
| 5739 | enst00000483269 | sg00000156030 | elmsan1-210 | 14 | 73722366 | 73725339 | - | lnc_RNA | retained_intron |
| 7533 | enst00000476562 | sg00000156030 | elmsan1-208 | 14 | 73715124 | 73727133 | - | lnc_RNA | retained_intron |
| 9576 | enst00000462716 | sg00000156030 | elmsan1-207 | 14 | 73723162 | 73729176 | - | lnc_RNA | retained_intron |
| -18079 | enst00000557304 | sg00000258660 | ac006146.1-201 | 14 | 73698103 | 73700351 | - | lnc_RNA | lncrna |
| 19874 | enst00000451078 | sg00000156030 | elmsan1-206 | 14 | 73719382 | 73739474 | - | mRNA | nonsense_mediated_decay |
| 20655 | enst00000423556 | sg00000156030 | elmsan1-204 | 14 | 73718843 | 73740255 | - | mRNA | protein_coding |
| 35416 | enst00000421708 | sg00000156030 | elmsan1-203 | 14 | 73739812 | 73755016 | - | mRNA | protein_coding |
| 39147 | enst00000582238 | sg00000264741 | mir4505-201 | 14 | 73758747 | 73758819 | + | miRNA | mirna |
| 40698 | enst00000435371 | sg00000156030 | elmsan1-205 | 14 | 73719383 | 73760298 | - | mRNA | protein_coding |
| 40698 | enst00000286523 | sg00000156030 | elmsan1-201 | 14 | 73715131 | 73760298 | - | mRNA | protein_coding |
| -58770 | enst00000516098 | sg00000251907 | rnu6-240p-201 | 14 | 73659564 | 73659660 | - | snRNA | snrna |
| -59568 | enst00000554159 | sg00000119661 | dnal1-204 | 14 | 73658862 | 73696075 | + | mRNA | nonsense_mediated_decay |
| -59583 | enst00000559993 | sg00000119661 | dnal1-209 | 14 | 73658847 | 73689517 | + | mRNA | protein_coding |
| 67658 | enst00000394071 | sg00000156030 | elmsan1-202 | 14 | 73715122 | 73787258 | - | mRNA | protein_coding |
| 67755 | enst00000668116 | sg00000259065 | ac005520.4-201 | 14 | 73787355 | 73803231 | + | lnc_RNA | lncrna |
| 67760 | enst00000556194 | sg00000259065 | ac005520.4-202 | 14 | 73787360 | 73803300 | + | lnc_RNA | lncrna |
| 69365 | enst00000553470 | sg00000259065 | ac005520.4-203 | 14 | 73788965 | 73803270 | + | lnc_RNA | lncrna |
| 70685 | enst00000486739 | sg00000156030 | elmsan1-211 | 14 | 73740031 | 73790285 | - | lnc_RNA | processed_transcript |
| -73403 | enst00000554871 | sg00000119661 | dnal1-206 | 14 | 73645027 | 73695942 | + | mRNA | protein_coding |
| -73412 | enst00000554339 | sg00000119661 | dnal1-205 | 14 | 73645018 | 73696156 | + | mRNA | protein_coding |
| -73413 | enst00000555919 | sg00000119661 | dnal1-208 | 14 | 73645017 | 73687268 | + | mRNA | protein_coding |
| -73421 | enst00000311089 | sg00000119661 | dnal1-201 | 14 | 73645009 | 73697760 | + | mRNA | protein_coding |
| -73439 | enst00000555631 | sg00000119661 | dnal1-207 | 14 | 73644991 | 73689515 | + | mRNA | protein_coding |
| -73444 | enst00000553645 | sg00000119661 | dnal1-202 | 14 | 73644986 | 73703732 | + | mRNA | protein_coding |
| -73555 | enst00000554113 | sg00000119661 | dnal1-203 | 14 | 73644875 | 73689493 | + | mRNA | protein_coding |
| -84489 | enst00000617980 | sg00000258603 | ac005225.2-203 | 14 | 73619690 | 73633941 | - | lnc_RNA | lncrna |
| -84652 | enst00000555011 | sg00000258603 | ac005225.2-202 | 14 | 73616700 | 73633778 | - | lnc_RNA | lncrna |
| -84708 | enst00000664243 | sg00000258603 | ac005225.2-201 | 14 | 73555115 | 73633722 | - | lnc_RNA | lncrna |
| -86955 | enst00000557330 | sg00000258972 | ndufb8p1-201 | 14 | 73631475 | 73632019 | + | pseudogenic_transcript | processed_pseudogene |
| -101586 | enst00000381139 | sg00000205669 | acot6-201 | 14 | 73616844 | 73619888 | + | mRNA | protein_coding |
| -105913 | enst00000645972 | sg00000205669 | acot6-203 | 14 | 73612517 | 73619888 | + | mRNA | protein_coding |
| -107485 | enst00000554229 | sg00000205669 | acot6-202 | 14 | 73610945 | 73619721 | + | mRNA | protein_coding |
| 110535 | enst00000555539 | sg00000258586 | linc02274-201 | 14 | 73822559 | 73830135 | - | lnc_RNA | lncrna |
| 121009 | enst00000604337 | sg00000270576 | ac005520.6-201 | 14 | 73840520 | 73840609 | - | pseudogenic_transcript | processed_pseudogene |
| -126724 | enst00000326303 | sg00000177465 | acot4-201 | 14 | 73591706 | 73596496 | + | mRNA | protein_coding |
| 132244 | enst00000555228 | sg00000140043 | ptgr2-204 | 14 | 73851844 | 73885456 | + | mRNA | protein_coding |
| 132246 | enst00000555661 | sg00000140043 | ptgr2-205 | 14 | 73851846 | 73886827 | + | mRNA | protein_coding |
| 132328 | enst00000555976 | sg00000140043 | ptgr2-206 | 14 | 73851928 | 73874627 | + | lnc_RNA | processed_transcript |
| 132346 | enst00000553326 | sg00000140043 | ptgr2-202 | 14 | 73851946 | 73861726 | + | lnc_RNA | processed_transcript |
| 132347 | enst00000267568 | sg00000140043 | ptgr2-201 | 14 | 73851947 | 73885459 | + | mRNA | protein_coding |
| 132371 | enst00000556551 | sg00000258653 | ac005520.3-201 | 14 | 73851971 | 73932278 | + | mRNA | nonsense_mediated_decay |
| -137736 | enst00000623547 | sg00000279026 | ac005225.4-201 | 14 | 73580694 | 73582918 | + | unconfirmed_transcript | tec |
| 138538 | enst00000556219 | sg00000140043 | ptgr2-207 | 14 | 73858138 | 73884579 | + | lnc_RNA | retained_intron |
| 138565 | enst00000411368 | sg00000223300 | ac005520.2-201 | 14 | 73858061 | 73858165 | - | ncRNA | misc_rna |
| 140938 | enst00000553813 | sg00000140043 | ptgr2-203 | 14 | 73860538 | 73884579 | + | mRNA | protein_coding |
| -144126 | enst00000557857 | sg00000119673 | acot2-203 | 14 | 73574304 | 73575201 | + | lnc_RNA | processed_transcript |
| -146763 | enst00000554092 | sg00000258524 | nt5cp1-201 | 14 | 73571159 | 73571667 | - | pseudogenic_transcript | processed_pseudogene |
| -149145 | enst00000613168 | sg00000119673 | acot2-204 | 14 | 73569285 | 73575658 | + | mRNA | protein_coding |
| -149315 | enst00000622407 | sg00000119673 | acot2-205 | 14 | 73569115 | 73575653 | + | mRNA | protein_coding |
| -149371 | enst00000238651 | sg00000119673 | acot2-201 | 14 | 73569059 | 73575653 | + | mRNA | protein_coding |
| -150810 | enst00000538782 | sg00000119673 | acot2-202 | 14 | 73567620 | 73575653 | + | mRNA | nonsense_mediated_decay |
| -159483 | enst00000334988 | sg00000187105 | heatr4-201 | 14 | 73478487 | 73558947 | - | mRNA | protein_coding |
| -159485 | enst00000563329 | sg00000187105 | heatr4-205 | 14 | 73523045 | 73558945 | - | mRNA | protein_coding |
| -159509 | enst00000553558 | sg00000187105 | heatr4-202 | 14 | 73478486 | 73558921 | - | mRNA | protein_coding |
| 165835 | enst00000648345 | sg00000273711 | ac005520.7-201 | 14 | 73873689 | 73885435 | - | lnc_RNA | lncrna |
| 165955 | enst00000613926 | sg00000273711 | ac005520.7-202 | 14 | 73885392 | 73885555 | - | lnc_RNA | lncrna |
| 167017 | enst00000540593 | sg00000119725 | znf410-206 | 14 | 73886617 | 73931597 | + | mRNA | protein_coding |
| 167134 | enst00000555730 | sg00000119725 | znf410-214 | 14 | 73886734 | 73932263 | + | mRNA | protein_coding |
| 167205 | enst00000324593 | sg00000119725 | znf410-201 | 14 | 73886805 | 73932278 | + | mRNA | protein_coding |
| 167208 | enst00000556396 | sg00000119725 | znf410-217 | 14 | 73886808 | 73931840 | + | mRNA | nonsense_mediated_decay |
| 167259 | enst00000412490 | sg00000119725 | znf410-204 | 14 | 73886859 | 73909605 | + | lnc_RNA | processed_transcript |
| 167259 | enst00000555602 | sg00000119725 | znf410-212 | 14 | 73886859 | 73905046 | + | lnc_RNA | processed_transcript |
| 167259 | enst00000557495 | sg00000119725 | znf410-221 | 14 | 73886859 | 73896506 | + | mRNA | protein_coding |
| 167259 | enst00000556659 | sg00000119725 | znf410-218 | 14 | 73886859 | 73896523 | + | mRNA | protein_coding |
| 167261 | enst00000541357 | sg00000119725 | znf410-207 | 14 | 73886861 | 73923525 | + | lnc_RNA | processed_transcript |
| 167271 | enst00000442160 | sg00000119725 | znf410-205 | 14 | 73886871 | 73931817 | + | mRNA | protein_coding |
| 167271 | enst00000398139 | sg00000119725 | znf410-203 | 14 | 73886871 | 73932278 | + | mRNA | nonsense_mediated_decay |
| 167271 | enst00000555044 | sg00000119725 | znf410-211 | 14 | 73886871 | 73932511 | + | mRNA | protein_coding |
| 167458 | enst00000556160 | sg00000119725 | znf410-215 | 14 | 73887058 | 73896370 | + | mRNA | protein_coding |
| 168650 | enst00000554582 | sg00000119725 | znf410-209 | 14 | 73888250 | 73904035 | + | mRNA | nonsense_mediated_decay |
| 172250 | enst00000554797 | sg00000119725 | znf410-210 | 14 | 73891850 | 73896357 | + | mRNA | protein_coding |
| 172425 | enst00000334521 | sg00000119725 | znf410-202 | 14 | 73892025 | 73932247 | + | mRNA | protein_coding |
| 172576 | enst00000615736 | sg00000119725 | znf410-223 | 14 | 73892176 | 73924803 | + | mRNA | protein_coding |
| 173689 | enst00000556797 | sg00000119725 | znf410-219 | 14 | 73893289 | 73898518 | + | mRNA | protein_coding |
| -178649 | enst00000553305 | sg00000258408 | nt5cp2-201 | 14 | 73539221 | 73539781 | - | pseudogenic_transcript | transcribed_processed_pseudogene |
| -181036 | enst00000557556 | sg00000184227 | acot1-202 | 14 | 73537394 | 73543710 | + | mRNA | protein_coding |
| -181287 | enst00000311148 | sg00000184227 | acot1-201 | 14 | 73537143 | 73543796 | + | mRNA | protein_coding |
| 182606 | enst00000639051 | sg00000119725 | znf410-224 | 14 | 73902206 | 73927232 | + | mRNA | protein_coding |
| 184100 | enst00000554316 | sg00000119725 | znf410-208 | 14 | 73903700 | 73921065 | + | mRNA | protein_coding |
| 184432 | enst00000557679 | sg00000119725 | znf410-222 | 14 | 73904032 | 73922846 | + | lnc_RNA | retained_intron |
| 185309 | enst00000555620 | sg00000119725 | znf410-213 | 14 | 73904909 | 73921327 | + | lnc_RNA | retained_intron |
| 185667 | enst00000602874 | sg00000270140 | ac005520.5-201 | 14 | 73905267 | 73905636 | + | lnc_RNA | lncrna |
| 186827 | enst00000362602 | sg00000199472 | ac005520.1-201 | 14 | 73906316 | 73906427 | - | ncRNA | misc_rna |
| -187218 | enst00000556455 | sg00000187105 | heatr4-203 | 14 | 73522580 | 73531212 | - | mRNA | protein_coding |
| -187233 | enst00000557603 | sg00000187105 | heatr4-204 | 14 | 73523036 | 73531197 | - | mRNA | protein_coding |
| -195552 | enst00000555972 | sg00000258695 | ac005225.3-201 | 14 | 73522878 | 73530610 | + | lnc_RNA | lncrna |
| -197782 | enst00000553394 | sg00000258443 | ac005225.1-201 | 14 | 73517233 | 73520648 | - | lnc_RNA | lncrna |
| 200546 | enst00000556179 | sg00000119725 | znf410-216 | 14 | 73920146 | 73923525 | + | mRNA | protein_coding |
| 201396 | enst00000557214 | sg00000119725 | znf410-220 | 14 | 73920996 | 73931664 | + | mRNA | protein_coding |
| 203039 | enst00000554009 | sg00000258891 | ac005480.1-201 | 14 | 73896164 | 73922639 | - | lnc_RNA | lncrna |
| 218494 | enst00000556794 | sg00000156050 | fam161b-202 | 14 | 73931501 | 73938094 | - | mRNA | protein_coding |
| 218514 | enst00000555916 | sg00000258891 | ac005480.1-202 | 14 | 73913067 | 73938114 | - | lnc_RNA | lncrna |
| -226650 | enst00000565094 | sg00000187105 | heatr4-206 | 14 | 73478484 | 73491780 | - | lnc_RNA | processed_transcript |
| -227497 | enst00000304061 | sg00000170468 | riox1-201 | 14 | 73490933 | 73493394 | + | mRNA | protein_coding |
| 230326 | enst00000394026 | sg00000119723 | coq6-202 | 14 | 73949926 | 73963108 | + | mRNA | protein_coding |
| 230340 | enst00000554341 | sg00000119723 | coq6-209 | 14 | 73949940 | 73963065 | + | mRNA | nonsense_mediated_decay |
| 230494 | enst00000286544 | sg00000156050 | fam161b-201 | 14 | 73932276 | 73950094 | - | mRNA | protein_coding |
| 230619 | enst00000553462 | sg00000119723 | coq6-204 | 14 | 73950219 | 73959355 | + | lnc_RNA | retained_intron |
| 230652 | enst00000629426 | sg00000119723 | coq6-220 | 14 | 73950252 | 73963108 | + | mRNA | protein_coding |
| 230699 | enst00000556300 | sg00000119723 | coq6-215 | 14 | 73950299 | 73958875 | + | lnc_RNA | retained_intron |
| 230701 | enst00000557584 | sg00000119723 | coq6-218 | 14 | 73950301 | 73959481 | + | mRNA | nonsense_mediated_decay |
| 230702 | enst00000334571 | sg00000119723 | coq6-201 | 14 | 73950302 | 73963670 | + | mRNA | protein_coding |
| 230708 | enst00000554920 | sg00000119723 | coq6-210 | 14 | 73950308 | 73963112 | + | mRNA | protein_coding |
| 230710 | enst00000554217 | sg00000119723 | coq6-207 | 14 | 73950310 | 73953812 | + | lnc_RNA | retained_intron |
| 230710 | enst00000553922 | sg00000119723 | coq6-205 | 14 | 73950310 | 73955960 | + | lnc_RNA | retained_intron |
| 230710 | enst00000554193 | sg00000119723 | coq6-206 | 14 | 73950310 | 73956000 | + | lnc_RNA | retained_intron |
| 230710 | enst00000555552 | sg00000119723 | coq6-214 | 14 | 73950310 | 73956482 | + | lnc_RNA | processed_transcript |
| 230710 | enst00000557205 | sg00000119723 | coq6-217 | 14 | 73950310 | 73958943 | + | lnc_RNA | retained_intron |
| 230814 | enst00000651776 | sg00000156050 | fam161b-203 | 14 | 73932996 | 73950414 | - | mRNA | protein_coding |
| 230903 | enst00000555196 | sg00000119723 | coq6-211 | 14 | 73950503 | 73956752 | + | mRNA | nonsense_mediated_decay |
| 230924 | enst00000554320 | sg00000119723 | coq6-208 | 14 | 73950524 | 73961293 | + | mRNA | protein_coding |
| 233838 | enst00000555392 | sg00000119723 | coq6-212 | 14 | 73953438 | 73956790 | + | lnc_RNA | retained_intron |
| 235730 | enst00000555511 | sg00000119723 | coq6-213 | 14 | 73955330 | 73961295 | + | lnc_RNA | retained_intron |
| -237508 | enst00000566478 | sg00000187105 | heatr4-207 | 14 | 73478489 | 73480922 | - | lnc_RNA | processed_transcript |
| 238892 | enst00000556588 | sg00000119723 | coq6-216 | 14 | 73958492 | 73963111 | + | lnc_RNA | retained_intron |
| 239307 | enst00000553448 | sg00000119723 | coq6-203 | 14 | 73958907 | 73960866 | + | lnc_RNA | retained_intron |
| 239899 | enst00000557780 | sg00000119723 | coq6-219 | 14 | 73959499 | 73963108 | + | lnc_RNA | processed_transcript |
| -252263 | enst00000646944 | sg00000284930 | ac005280.2-203 | 14 | 73459009 | 73466167 | - | lnc_RNA | lncrna |
| 253334 | enst00000555829 | sg00000187097 | entpd5-204 | 14 | 73961084 | 73972934 | - | mRNA | protein_coding |
| -254788 | enst00000553415 | sg00000285006 | ac005280.3-202 | 14 | 73409976 | 73463642 | - | lnc_RNA | lncrna |
| -254795 | enst00000647202 | sg00000284930 | ac005280.2-201 | 14 | 73458850 | 73463635 | - | lnc_RNA | lncrna |
| -254805 | enst00000556700 | sg00000285006 | ac005280.3-201 | 14 | 73366897 | 73463625 | - | lnc_RNA | lncrna |
| -254805 | enst00000557581 | sg00000284930 | ac005280.2-205 | 14 | 73462246 | 73463625 | - | lnc_RNA | lncrna |
| -254812 | enst00000557577 | sg00000284930 | ac005280.2-204 | 14 | 73460935 | 73463618 | - | lnc_RNA | lncrna |
| -254845 | enst00000643731 | sg00000284930 | ac005280.2-202 | 14 | 73459009 | 73463585 | - | lnc_RNA | lncrna |
| -255932 | enst00000561382 | sg00000251393 | ac005280.1-202 | 14 | 73462498 | 73463879 | + | lnc_RNA | retained_intron |
| -255960 | enst00000666612 | sg00000251393 | ac005280.1-204 | 14 | 73462470 | 73464459 | + | lnc_RNA | lncrna |
| -256007 | enst00000515412 | sg00000251393 | ac005280.1-201 | 14 | 73462423 | 73477175 | + | lnc_RNA | lncrna |
| -256068 | enst00000654900 | sg00000251393 | ac005280.1-203 | 14 | 73462362 | 73464391 | + | lnc_RNA | lncrna |
| -259813 | enst00000554546 | sg00000133961 | numb-211 | 14 | 73275107 | 73458617 | - | mRNA | protein_coding |
| -259850 | enst00000555394 | sg00000133961 | numb-215 | 14 | 73275673 | 73458580 | - | mRNA | protein_coding |
| -259853 | enst00000555987 | sg00000133961 | numb-218 | 14 | 73292787 | 73458577 | - | mRNA | protein_coding |
| -259853 | enst00000557774 | sg00000133961 | numb-226 | 14 | 73322801 | 73458577 | - | lnc_RNA | retained_intron |
| -259853 | enst00000556112 | sg00000133961 | numb-219 | 14 | 73297261 | 73458577 | - | lnc_RNA | retained_intron |
| -259859 | enst00000556600 | sg00000133961 | numb-220 | 14 | 73409150 | 73458571 | - | lnc_RNA | processed_transcript |
| -259884 | enst00000554315 | sg00000133961 | numb-208 | 14 | 73286193 | 73458546 | - | lnc_RNA | retained_intron |
| -259900 | enst00000555238 | sg00000133961 | numb-213 | 14 | 73275216 | 73458530 | - | mRNA | protein_coding |
| -259907 | enst00000554394 | sg00000133961 | numb-209 | 14 | 73284254 | 73458523 | - | mRNA | protein_coding |
| -259908 | enst00000557597 | sg00000133961 | numb-225 | 14 | 73275216 | 73458522 | - | mRNA | protein_coding |
| -259911 | enst00000356296 | sg00000133961 | numb-202 | 14 | 73275216 | 73458519 | - | mRNA | protein_coding |
| -260144 | enst00000554818 | sg00000133961 | numb-212 | 14 | 73323130 | 73458286 | - | mRNA | protein_coding |
| -260147 | enst00000555307 | sg00000133961 | numb-214 | 14 | 73284254 | 73458283 | - | mRNA | protein_coding |
| -260492 | enst00000557031 | sg00000133961 | numb-223 | 14 | 73355727 | 73457938 | - | lnc_RNA | processed_transcript |
| 276708 | enst00000553284 | sg00000187097 | entpd5-202 | 14 | 73976333 | 73996308 | - | mRNA | protein_coding |
| 283796 | enst00000624550 | sg00000279461 | ac005480.2-201 | 14 | 74003396 | 74003470 | + | pseudogenic_transcript | processed_pseudogene |
| 296328 | enst00000557325 | sg00000187097 | entpd5-207 | 14 | 73958010 | 74015928 | - | mRNA | protein_coding |
| 299671 | enst00000557681 | sg00000187097 | entpd5-208 | 14 | 74008930 | 74019271 | - | lnc_RNA | retained_intron |
| 299697 | enst00000556108 | sg00000187097 | entpd5-205 | 14 | 73996517 | 74019297 | - | lnc_RNA | processed_transcript |
| 299710 | enst00000556242 | sg00000187097 | entpd5-206 | 14 | 73986224 | 74019310 | - | mRNA | protein_coding |
| 299732 | enst00000334696 | sg00000187097 | entpd5-201 | 14 | 73962693 | 74019332 | - | mRNA | protein_coding |
| 299749 | enst00000394009 | sg00000119636 | bbof1-201 | 14 | 74019349 | 74066092 | + | mRNA | protein_coding |
| 299753 | enst00000464394 | sg00000119636 | bbof1-203 | 14 | 74019353 | 74048074 | + | mRNA | protein_coding |
| 299799 | enst00000554664 | sg00000187097 | entpd5-203 | 14 | 73988147 | 74019399 | - | lnc_RNA | processed_transcript |
| 299846 | enst00000489323 | sg00000119636 | bbof1-205 | 14 | 74019446 | 74048075 | + | lnc_RNA | processed_transcript |
| 299848 | enst00000463558 | sg00000119636 | bbof1-202 | 14 | 74019448 | 74040817 | + | mRNA | protein_coding |
| -308359 | enst00000555859 | sg00000133961 | numb-217 | 14 | 73284251 | 73410071 | - | mRNA | protein_coding |
| 312197 | enst00000492026 | sg00000119636 | bbof1-206 | 14 | 74031797 | 74082863 | + | lnc_RNA | processed_transcript |
| 326491 | enst00000477986 | sg00000119636 | bbof1-204 | 14 | 74046091 | 74048592 | + | lnc_RNA | retained_intron |
| 335933 | enst00000492247 | sg00000119636 | bbof1-207 | 14 | 74055533 | 74057459 | + | lnc_RNA | retained_intron |
| 349658 | enst00000555126 | sg00000119711 | aldh6a1-206 | 14 | 74060415 | 74069258 | - | mRNA | protein_coding |
| -351510 | enst00000554521 | sg00000133961 | numb-210 | 14 | 73276549 | 73366920 | - | mRNA | protein_coding |
| -351510 | enst00000555738 | sg00000133961 | numb-216 | 14 | 73276549 | 73366920 | - | mRNA | protein_coding |
| -351510 | enst00000559312 | sg00000133961 | numb-227 | 14 | 73276549 | 73366920 | - | mRNA | protein_coding |
| -351510 | enst00000560335 | sg00000133961 | numb-228 | 14 | 73276549 | 73366920 | - | mRNA | protein_coding |
| -362661 | enst00000355058 | sg00000133961 | numb-201 | 14 | 73275210 | 73355769 | - | mRNA | protein_coding |
| -362661 | enst00000535282 | sg00000133961 | numb-204 | 14 | 73275210 | 73355769 | - | mRNA | protein_coding |
| -362661 | enst00000544991 | sg00000133961 | numb-205 | 14 | 73275210 | 73355769 | - | mRNA | protein_coding |
| -362661 | enst00000359560 | sg00000133961 | numb-203 | 14 | 73275210 | 73355769 | - | mRNA | protein_coding |
| 364820 | enst00000553814 | sg00000119711 | aldh6a1-203 | 14 | 74071368 | 74084420 | - | lnc_RNA | processed_transcript |
| 364847 | enst00000556852 | sg00000119711 | aldh6a1-207 | 14 | 74071878 | 74084447 | - | lnc_RNA | processed_transcript |
| 364847 | enst00000350259 | sg00000119711 | aldh6a1-201 | 14 | 74060395 | 74084447 | - | mRNA | protein_coding |
| 364849 | enst00000554501 | sg00000119711 | aldh6a1-205 | 14 | 74060247 | 74084449 | - | lnc_RNA | retained_intron |
| 364853 | enst00000553458 | sg00000119711 | aldh6a1-202 | 14 | 74056847 | 74084453 | - | mRNA | protein_coding |
| 364892 | enst00000554231 | sg00000119711 | aldh6a1-204 | 14 | 74070700 | 74084492 | - | lnc_RNA | retained_intron |
| 365196 | enst00000555028 | sg00000205659 | lin52-205 | 14 | 74084796 | 74201235 | + | mRNA | protein_coding |
| 365356 | enst00000554938 | sg00000205659 | lin52-204 | 14 | 74084956 | 74199251 | + | mRNA | protein_coding |
| 365360 | enst00000553404 | sg00000205659 | lin52-201 | 14 | 74084960 | 74200438 | + | lnc_RNA | retained_intron |
| 365363 | enst00000554076 | sg00000205659 | lin52-202 | 14 | 74084963 | 74114295 | + | lnc_RNA | processed_transcript |
| 365905 | enst00000554289 | sg00000205659 | lin52-203 | 14 | 74085505 | 74097860 | + | lnc_RNA | retained_intron |
| -419055 | enst00000556772 | sg00000133961 | numb-221 | 14 | 73275218 | 73299375 | - | mRNA | protein_coding |
| -420554 | enst00000556989 | sg00000133961 | numb-222 | 14 | 73286225 | 73297876 | - | lnc_RNA | retained_intron |
| -431173 | enst00000553997 | sg00000133961 | numb-206 | 14 | 73281414 | 73287257 | - | lnc_RNA | processed_transcript |
| -431257 | enst00000557486 | sg00000133961 | numb-224 | 14 | 73282245 | 73287173 | - | lnc_RNA | retained_intron |
| -432868 | enst00000554014 | sg00000133961 | numb-207 | 14 | 73277209 | 73285562 | - | lnc_RNA | retained_intron |
| -444349 | enst00000556578 | sg00000258944 | ac004846.2-201 | 14 | 73272182 | 73274081 | - | lnc_RNA | lncrna |
| -450051 | enst00000554527 | sg00000100767 | papln-205 | 14 | 73268379 | 73272933 | + | lnc_RNA | retained_intron |
| 454856 | enst00000485097 | sg00000239910 | rn7sl530p-201 | 14 | 74174456 | 74174753 | + | ncRNA | misc_rna |
| -455930 | enst00000559759 | sg00000100767 | papln-211 | 14 | 73262500 | 73274620 | + | mRNA | protein_coding |
| -456380 | enst00000555700 | sg00000100767 | papln-209 | 14 | 73262050 | 73274623 | + | lnc_RNA | retained_intron |
| -457264 | enst00000554314 | sg00000100767 | papln-204 | 14 | 73261166 | 73264576 | + | lnc_RNA | processed_transcript |
| -457274 | enst00000557061 | sg00000100767 | papln-210 | 14 | 73261156 | 73274620 | + | mRNA | nonsense_mediated_decay |
| -468654 | enst00000555035 | sg00000100767 | papln-206 | 14 | 73249776 | 73251018 | + | lnc_RNA | retained_intron |
| -471550 | enst00000517030 | sg00000252839 | rnu6-419p-201 | 14 | 73246818 | 73246880 | - | snRNA | snrna |
| -472451 | enst00000554614 | sg00000258376 | ac004846.1-201 | 14 | 73242651 | 73245979 | - | lnc_RNA | lncrna |
| 472989 | enst00000555526 | sg00000258513 | ac006349.1-201 | 14 | 74192589 | 74192823 | + | pseudogenic_transcript | transcribed_processed_pseudogene |
| -478805 | enst00000555445 | sg00000100767 | papln-208 | 14 | 73239625 | 73273003 | + | mRNA | protein_coding |
| -478814 | enst00000554301 | sg00000100767 | papln-203 | 14 | 73239616 | 73272754 | + | mRNA | protein_coding |
| -480850 | enst00000216658 | sg00000100767 | papln-201 | 14 | 73237580 | 73273365 | + | mRNA | nonsense_mediated_decay |
| -480851 | enst00000555123 | sg00000100767 | papln-207 | 14 | 73237579 | 73273365 | + | mRNA | nonsense_mediated_decay |
| -480933 | enst00000340738 | sg00000100767 | papln-202 | 14 | 73237497 | 73274640 | + | mRNA | protein_coding |
| -480933 | enst00000644200 | sg00000100767 | papln-212 | 14 | 73237497 | 73274637 | + | mRNA | protein_coding |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc