CpG interval report generated on 20/05/20 with pycoMeth 0.4.6

Interval details
pvalue rank chromosome start end length number of samples number of CpGs pvalue adjusted pvalue
#140 19 49337904 49339149 1245 3 36 4.88975e-16 3.45527e-14
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
distance to tss transcript id gene id transcript name chromosome start end strand feature type transcript biotype
-689 enst00000594743 sg00000104894 cd37-206 19 49337215 49340027 + mRNA protein_coding
1133 enst00000602554 sg00000197813 ac011450.1-201 19 49331617 49340282 - lnc_RNA lncrna
1154 enst00000358234 sg00000197813 ac011450.1-202 19 49331525 49340303 - lnc_RNA lncrna
1446 enst00000600121 sg00000104894 cd37-215 19 49340595 49343335 + lnc_RNA processed_transcript
-2440 enst00000595660 sg00000104894 cd37-207 19 49335464 49337217 + mRNA protein_coding
-2447 enst00000597602 sg00000104894 cd37-211 19 49335457 49337163 + mRNA protein_coding
-2458 enst00000598134 sg00000104894 cd37-214 19 49335446 49337246 + lnc_RNA retained_intron
-2470 enst00000596426 sg00000104894 cd37-209 19 49335434 49338201 + lnc_RNA processed_transcript
-2477 enst00000535669 sg00000104894 cd37-204 19 49335427 49340205 + mRNA protein_coding
-2486 enst00000597852 sg00000104894 cd37-212 19 49335418 49340606 + lnc_RNA retained_intron
-2498 enst00000593512 sg00000104894 cd37-205 19 49335406 49337961 + lnc_RNA retained_intron
-2498 enst00000323906 sg00000104894 cd37-201 19 49335406 49340606 + mRNA protein_coding
-2504 enst00000595725 sg00000104894 cd37-208 19 49335400 49340466 + mRNA nonsense_mediated_decay
-2508 enst00000598095 sg00000104894 cd37-213 19 49335396 49340132 + mRNA protein_coding
-2508 enst00000426897 sg00000104894 cd37-203 19 49335396 49340575 + mRNA protein_coding
-2699 enst00000597033 sg00000104894 cd37-210 19 49335205 49337682 + lnc_RNA processed_transcript
-2733 enst00000391859 sg00000104894 cd37-202 19 49335171 49340602 + mRNA nonsense_mediated_decay
-12689 enst00000598828 sg00000063127 slc6a16-207 19 49290691 49325215 - mRNA protein_coding
-12713 enst00000335875 sg00000063127 slc6a16-201 19 49289638 49325191 - mRNA protein_coding
-12719 enst00000454748 sg00000063127 slc6a16-202 19 49289765 49325185 - mRNA protein_coding
-12772 enst00000598221 sg00000063127 slc6a16-206 19 49293150 49325132 - lnc_RNA retained_intron
17003 enst00000596488 sg00000268157 ac010524.1-201 19 49356152 49357769 + lnc_RNA lncrna
18106 enst00000598823 sg00000074219 tead2-209 19 49347224 49357255 - mRNA nonsense_mediated_decay
18107 enst00000598397 sg00000074219 tead2-207 19 49347233 49357256 - lnc_RNA processed_transcript
20708 enst00000595233 sg00000074219 tead2-205 19 49359305 49359857 - lnc_RNA retained_intron
21289 enst00000377214 sg00000074219 tead2-202 19 49340600 49360438 - mRNA protein_coding
22346 enst00000598810 sg00000074219 tead2-208 19 49340595 49361495 - mRNA protein_coding
22634 enst00000594268 sg00000104901 dkkl1-202 19 49361783 49375116 + mRNA protein_coding
23233 enst00000593945 sg00000074219 tead2-204 19 49340595 49362382 - mRNA protein_coding
23258 enst00000601519 sg00000074219 tead2-210 19 49340595 49362407 - mRNA protein_coding
23292 enst00000539846 sg00000074219 tead2-203 19 49341082 49362441 - mRNA protein_coding
23292 enst00000596757 sg00000074219 tead2-206 19 49347357 49362441 - mRNA protein_coding
23308 enst00000311227 sg00000074219 tead2-201 19 49340595 49362457 - mRNA protein_coding
23925 enst00000597873 sg00000104901 dkkl1-205 19 49363074 49374961 + mRNA protein_coding
24581 enst00000596402 sg00000104901 dkkl1-203 19 49363730 49374899 + mRNA protein_coding
24728 enst00000221498 sg00000104901 dkkl1-201 19 49363877 49375116 + mRNA protein_coding
24785 enst00000597546 sg00000104901 dkkl1-204 19 49363934 49374991 + mRNA protein_coding
25506 enst00000598682 sg00000104901 dkkl1-206 19 49364655 49375116 + mRNA protein_coding
-27493 enst00000594917 sg00000063127 slc6a16-204 19 49306085 49310411 - mRNA protein_coding
-27758 enst00000597969 sg00000063127 slc6a16-205 19 49305885 49310146 - mRNA protein_coding
-28952 enst00000594180 sg00000063127 slc6a16-203 19 49305757 49308952 - mRNA protein_coding
-29036 enst00000584846 sg00000265407 mir4324-201 19 49308797 49308868 - miRNA mirna
48932 enst00000599433 sg00000268686 ac010643.1-201 19 49368705 49388081 - lnc_RNA lncrna
48936 enst00000660123 sg00000268686 ac010643.1-203 19 49368558 49388085 - lnc_RNA lncrna
48942 enst00000657688 sg00000268686 ac010643.1-202 19 49375728 49388091 - lnc_RNA lncrna
49070 enst00000600895 sg00000161609 ccdc155-215 19 49388219 49394896 + lnc_RNA retained_intron
49100 enst00000447857 sg00000161609 ccdc155-201 19 49388249 49417990 + mRNA protein_coding
49134 enst00000596771 sg00000161609 ccdc155-210 19 49388283 49399805 + lnc_RNA retained_intron
49134 enst00000598730 sg00000161609 ccdc155-213 19 49388283 49395789 + mRNA protein_coding
49138 enst00000596862 sg00000161609 ccdc155-211 19 49388287 49394866 + lnc_RNA retained_intron
49148 enst00000597993 sg00000161609 ccdc155-212 19 49388297 49395134 + mRNA nonsense_mediated_decay
49151 enst00000593725 sg00000161609 ccdc155-204 19 49388300 49393743 + lnc_RNA processed_transcript
49152 enst00000594905 sg00000161609 ccdc155-206 19 49388301 49395265 + mRNA protein_coding
49168 enst00000595828 sg00000161609 ccdc155-207 19 49388317 49398121 + mRNA protein_coding
49231 enst00000594043 sg00000161609 ccdc155-205 19 49388380 49398093 + mRNA protein_coding
55394 enst00000600570 sg00000161609 ccdc155-214 19 49394543 49417989 + mRNA protein_coding
56543 enst00000596130 sg00000161609 ccdc155-208 19 49395692 49409031 + lnc_RNA retained_intron
58783 enst00000593631 sg00000161609 ccdc155-203 19 49397932 49399470 + lnc_RNA retained_intron
-62785 enst00000429430 sg00000235555 sumo1p4-201 19 49275119 49275420 + pseudogenic_transcript processed_pseudogene
68488 enst00000593362 sg00000161609 ccdc155-202 19 49407637 49415619 + lnc_RNA retained_intron
69124 enst00000596419 sg00000161609 ccdc155-209 19 49408273 49409862 + lnc_RNA retained_intron
-81802 enst00000599458 sg00000269009 slc6a21p-201 19 49255472 49256102 - pseudogenic_transcript processed_pseudogene
84292 enst00000270631 sg00000142538 pth2-201 19 49422419 49423441 - mRNA protein_coding
84600 enst00000576655 sg00000261949 gfy-201 19 49423749 49428818 + mRNA protein_coding
87282 enst00000610896 sg00000261949 gfy-202 19 49426431 49428818 + mRNA protein_coding
95512 enst00000596689 sg00000104888 slc17a7-202 19 49432622 49434661 - mRNA nonsense_mediated_decay
97031 enst00000600672 sg00000104888 slc17a7-205 19 49430755 49436180 - lnc_RNA retained_intron
99165 enst00000598018 sg00000104888 slc17a7-203 19 49433259 49438314 - lnc_RNA retained_intron
102378 enst00000221485 sg00000104888 slc17a7-201 19 49429401 49441527 - mRNA protein_coding
103211 enst00000600601 sg00000104888 slc17a7-204 19 49429986 49442360 - mRNA protein_coding
107750 enst00000602076 sg00000104872 pih1d1-223 19 49446299 49446899 - lnc_RNA retained_intron
107896 enst00000602226 sg00000104872 pih1d1-224 19 49446299 49447045 - lnc_RNA processed_transcript
108028 enst00000595633 sg00000104872 pih1d1-208 19 49446298 49447177 - lnc_RNA retained_intron
108861 enst00000598175 sg00000104872 pih1d1-215 19 49446299 49448010 - mRNA nonsense_mediated_decay
108861 enst00000596895 sg00000104872 pih1d1-211 19 49447214 49448010 - lnc_RNA retained_intron
108892 enst00000597577 sg00000104872 pih1d1-214 19 49446299 49448041 - mRNA nonsense_mediated_decay
108913 enst00000594845 sg00000104872 pih1d1-204 19 49446299 49448062 - mRNA nonsense_mediated_decay
109425 enst00000593629 sg00000104872 pih1d1-202 19 49446299 49448574 - lnc_RNA retained_intron
110371 enst00000598889 sg00000104872 pih1d1-216 19 49446299 49449520 - mRNA nonsense_mediated_decay
110438 enst00000600875 sg00000104872 pih1d1-219 19 49446299 49449587 - mRNA protein_coding
110494 enst00000596651 sg00000104872 pih1d1-210 19 49446299 49449643 - mRNA nonsense_mediated_decay
111687 enst00000596916 sg00000104872 pih1d1-212 19 49446298 49450836 - mRNA nonsense_mediated_decay
112381 enst00000601053 sg00000104872 pih1d1-220 19 49446742 49451530 - mRNA nonsense_mediated_decay
112452 enst00000601807 sg00000104872 pih1d1-221 19 49446401 49451601 - mRNA protein_coding
112599 enst00000599791 sg00000104872 pih1d1-218 19 49449111 49451748 - lnc_RNA retained_intron
112642 enst00000595074 sg00000104872 pih1d1-205 19 49448992 49451791 - lnc_RNA retained_intron
112651 enst00000595516 sg00000104872 pih1d1-206 19 49447287 49451800 - lnc_RNA retained_intron
112665 enst00000262265 sg00000104872 pih1d1-201 19 49446298 49451814 - mRNA protein_coding
112668 enst00000593900 sg00000104872 pih1d1-203 19 49447710 49451817 - lnc_RNA retained_intron
112752 enst00000595550 sg00000104872 pih1d1-207 19 49450891 49451901 - mRNA protein_coding
114076 enst00000540132 sg00000161618 aldh16a1-203 19 49453225 49470534 + mRNA protein_coding
114076 enst00000293350 sg00000161618 aldh16a1-201 19 49453225 49471050 + mRNA protein_coding
114077 enst00000599652 sg00000161618 aldh16a1-207 19 49453226 49470588 + lnc_RNA retained_intron
114087 enst00000455361 sg00000161618 aldh16a1-202 19 49453236 49470585 + mRNA protein_coding
114139 enst00000593417 sg00000161618 aldh16a1-204 19 49453288 49470587 + mRNA nonsense_mediated_decay
114150 enst00000598015 sg00000161618 aldh16a1-206 19 49453299 49459730 + lnc_RNA processed_transcript
114344 enst00000601825 sg00000104872 pih1d1-222 19 49449566 49453493 - mRNA protein_coding
114345 enst00000596049 sg00000104872 pih1d1-209 19 49446369 49453494 - mRNA protein_coding
114346 enst00000599366 sg00000104872 pih1d1-217 19 49447375 49453495 - mRNA protein_coding
114348 enst00000597415 sg00000104872 pih1d1-213 19 49447424 49453497 - mRNA protein_coding
123603 enst00000599536 sg00000269469 ac010619.2-201 19 49462752 49486231 + mRNA nonsense_mediated_decay
125290 enst00000600265 sg00000161618 aldh16a1-208 19 49464439 49468945 + mRNA nonsense_mediated_decay
-127170 enst00000597316 sg00000130529 trpm4-208 19 49210734 49211834 + mRNA protein_coding
-127303 enst00000599459 sg00000130529 trpm4-212 19 49210601 49211400 + lnc_RNA retained_intron
129144 enst00000594549 sg00000161618 aldh16a1-205 19 49468293 49470589 + lnc_RNA retained_intron
135058 enst00000601800 sg00000090554 flt3lg-212 19 49474207 49486231 + mRNA nonsense_mediated_decay
135066 enst00000597551 sg00000090554 flt3lg-206 19 49474215 49486231 + mRNA protein_coding
135079 enst00000596435 sg00000090554 flt3lg-205 19 49474228 49486231 + mRNA protein_coding
135087 enst00000204637 sg00000090554 flt3lg-201 19 49474236 49486231 + mRNA protein_coding
135087 enst00000600084 sg00000090554 flt3lg-210 19 49474236 49486231 + mRNA nonsense_mediated_decay
135103 enst00000600429 sg00000090554 flt3lg-211 19 49474252 49486151 + mRNA protein_coding
135412 enst00000594009 sg00000090554 flt3lg-203 19 49474561 49486231 + mRNA protein_coding
135434 enst00000593422 sg00000090554 flt3lg-202 19 49474583 49476730 + lnc_RNA retained_intron
135437 enst00000595815 sg00000273189 ac010619.3-201 19 49474586 49487637 + lnc_RNA lncrna
135453 enst00000595510 sg00000090554 flt3lg-204 19 49474602 49482391 + mRNA protein_coding
136631 enst00000598555 sg00000090554 flt3lg-209 19 49475780 49486231 + mRNA protein_coding
136960 enst00000598472 sg00000090554 flt3lg-208 19 49476109 49486029 + lnc_RNA retained_intron
139768 enst00000597914 sg00000090554 flt3lg-207 19 49478917 49481581 + mRNA protein_coding
148405 enst00000621674 sg00000142541 rpl13a-213 19 49487554 49492301 + mRNA protein_coding
148454 enst00000624069 sg00000142541 rpl13a-214 19 49487603 49492308 + mRNA nonsense_mediated_decay
148459 enst00000484279 sg00000142541 rpl13a-210 19 49487608 49491807 + mRNA nonsense_mediated_decay
148459 enst00000488946 sg00000142541 rpl13a-212 19 49487608 49492305 + lnc_RNA retained_intron
148459 enst00000391857 sg00000142541 rpl13a-201 19 49487608 49492308 + mRNA protein_coding
148459 enst00000472481 sg00000142541 rpl13a-204 19 49487608 49491228 + lnc_RNA retained_intron
148466 enst00000479992 sg00000142541 rpl13a-209 19 49487615 49491861 + lnc_RNA retained_intron
148467 enst00000486930 sg00000142541 rpl13a-211 19 49487616 49490851 + lnc_RNA retained_intron
148476 enst00000477613 sg00000142541 rpl13a-208 19 49487625 49491889 + lnc_RNA processed_transcript
148485 enst00000467825 sg00000142541 rpl13a-202 19 49487634 49491843 + mRNA protein_coding
-149036 enst00000595882 sg00000130529 trpm4-206 19 49188868 49196716 + lnc_RNA retained_intron
150701 enst00000476268 sg00000142541 rpl13a-206 19 49489850 49491811 + lnc_RNA retained_intron
150816 enst00000364805 sg00000201675 snord32a-201 19 49489965 49490048 + snoRNA snorna
151380 enst00000474171 sg00000142541 rpl13a-205 19 49490529 49491757 + lnc_RNA retained_intron
151466 enst00000362761 sg00000199631 snord33-201 19 49490615 49490699 + snoRNA snorna
151496 enst00000468655 sg00000142541 rpl13a-203 19 49490645 49491226 + lnc_RNA retained_intron
151691 enst00000476300 sg00000142541 rpl13a-207 19 49490840 49491814 + lnc_RNA retained_intron
151755 enst00000365633 sg00000202503 snord34-201 19 49490904 49490974 + snoRNA snorna
152026 enst00000363389 sg00000200259 snord35a-201 19 49491175 49491260 + snoRNA snorna
-155378 enst00000595071 sg00000130529 trpm4-204 19 49182526 49211836 + lnc_RNA retained_intron
157216 enst00000600027 sg00000142534 rps11-206 19 49496365 49499689 + lnc_RNA retained_intron
157221 enst00000599167 sg00000142534 rps11-204 19 49496370 49499689 + lnc_RNA retained_intron
157282 enst00000602252 sg00000142534 rps11-209 19 49496431 49499689 + lnc_RNA retained_intron
157283 enst00000596873 sg00000142534 rps11-203 19 49496432 49498251 + mRNA protein_coding
157285 enst00000270625 sg00000142534 rps11-201 19 49496434 49499708 + mRNA protein_coding
157285 enst00000594493 sg00000142534 rps11-202 19 49496434 49499689 + mRNA protein_coding
157287 enst00000601216 sg00000142534 rps11-207 19 49496436 49498080 + lnc_RNA retained_intron
157305 enst00000599561 sg00000142534 rps11-205 19 49496454 49499689 + mRNA protein_coding
157317 enst00000601306 sg00000142534 rps11-208 19 49496466 49499688 + mRNA nonsense_mediated_decay
158571 enst00000363660 sg00000200530 snord35b-201 19 49497720 49497806 + snoRNA snorna
161719 enst00000385048 sg00000207782 mir150-201 19 49500785 49500868 - miRNA mirna
163490 enst00000597056 sg00000268681 cox6cp7-201 19 49502432 49502639 - pseudogenic_transcript processed_pseudogene
167667 enst00000596147 sg00000104870 fcgrt-209 19 49506816 49524780 + lnc_RNA retained_intron
-169277 enst00000601347 sg00000130529 trpm4-214 19 49168627 49182755 + lnc_RNA processed_transcript
-170260 enst00000594568 sg00000130529 trpm4-203 19 49167644 49168337 + lnc_RNA retained_intron
173226 enst00000598491 sg00000104870 fcgrt-213 19 49512375 49514309 + mRNA protein_coding
173486 enst00000599701 sg00000104870 fcgrt-216 19 49512635 49514421 + mRNA protein_coding
173512 enst00000221466 sg00000104870 fcgrt-201 19 49512661 49526428 + mRNA protein_coding
173513 enst00000598927 sg00000104870 fcgrt-214 19 49512662 49526297 + mRNA nonsense_mediated_decay
174005 enst00000426395 sg00000104870 fcgrt-202 19 49513154 49526333 + mRNA protein_coding
174028 enst00000595677 sg00000104870 fcgrt-207 19 49513177 49521813 + lnc_RNA processed_transcript
174030 enst00000600273 sg00000104870 fcgrt-218 19 49513179 49514388 + mRNA protein_coding
174046 enst00000595881 sg00000104870 fcgrt-208 19 49513195 49526331 + lnc_RNA retained_intron
174048 enst00000594823 sg00000104870 fcgrt-206 19 49513197 49524664 + lnc_RNA processed_transcript
174106 enst00000599988 sg00000104870 fcgrt-217 19 49513255 49526333 + mRNA protein_coding
174230 enst00000596975 sg00000104870 fcgrt-210 19 49513379 49526329 + mRNA protein_coding
174241 enst00000598936 sg00000104870 fcgrt-215 19 49513390 49524568 + lnc_RNA retained_intron
174246 enst00000452439 sg00000104870 fcgrt-203 19 49513395 49525164 + lnc_RNA retained_intron
174249 enst00000593431 sg00000104870 fcgrt-205 19 49513398 49525012 + lnc_RNA retained_intron
174255 enst00000598319 sg00000104870 fcgrt-212 19 49513404 49525263 + mRNA nonsense_mediated_decay
174769 enst00000593381 sg00000104870 fcgrt-204 19 49513918 49524644 + mRNA protein_coding
174909 enst00000598076 sg00000104870 fcgrt-211 19 49514058 49526333 + mRNA protein_coding
-180072 enst00000598502 sg00000130529 trpm4-209 19 49157832 49211749 + mRNA nonsense_mediated_decay
-180072 enst00000596338 sg00000130529 trpm4-207 19 49157832 49211749 + lnc_RNA retained_intron
-180089 enst00000427978 sg00000130529 trpm4-202 19 49157815 49211680 + mRNA protein_coding
-180112 enst00000595519 sg00000130529 trpm4-205 19 49157792 49211836 + mRNA nonsense_mediated_decay
-180112 enst00000252826 sg00000130529 trpm4-201 19 49157792 49211836 + mRNA protein_coding
-180112 enst00000599628 sg00000130529 trpm4-213 19 49157792 49159921 + mRNA protein_coding
-180138 enst00000598697 sg00000130529 trpm4-211 19 49157766 49211834 + mRNA nonsense_mediated_decay
-180163 enst00000598691 sg00000130529 trpm4-210 19 49157741 49171373 + mRNA protein_coding
-182508 enst00000252825 sg00000130528 hrc-201 19 49151198 49155396 - mRNA protein_coding
-182661 enst00000595625 sg00000130528 hrc-203 19 49151289 49155243 - mRNA protein_coding
-184469 enst00000598858 sg00000130528 hrc-204 19 49151199 49153435 - mRNA protein_coding
-184597 enst00000595167 sg00000130528 hrc-202 19 49151955 49153307 - lnc_RNA retained_intron
-187946 enst00000602783 sg00000177380 ppfia3-209 19 49149958 49151021 + lnc_RNA retained_intron
188854 enst00000270645 sg00000142552 rcn3-201 19 49528003 49543633 + mRNA protein_coding
189141 enst00000597801 sg00000142552 rcn3-204 19 49528290 49537132 + mRNA protein_coding
-189331 enst00000602905 sg00000177380 ppfia3-213 19 49148573 49150354 + lnc_RNA retained_intron
189395 enst00000593644 sg00000142552 rcn3-203 19 49528544 49537084 + lnc_RNA processed_transcript
189477 enst00000598833 sg00000142552 rcn3-205 19 49528626 49546962 + mRNA protein_coding
-189803 enst00000602897 sg00000177380 ppfia3-212 19 49148101 49151021 + mRNA protein_coding
-192217 enst00000602800 sg00000177380 ppfia3-210 19 49145687 49146408 + lnc_RNA retained_intron
-194920 enst00000602848 sg00000177380 ppfia3-211 19 49142984 49151026 + mRNA protein_coding
203453 enst00000593483 sg00000142552 rcn3-202 19 49542602 49543633 + mRNA protein_coding
-209324 enst00000602726 sg00000177380 ppfia3-208 19 49128580 49130599 + lnc_RNA retained_intron
-209577 enst00000421230 sg00000177380 ppfia3-202 19 49128327 49142918 + lnc_RNA retained_intron
-209615 enst00000602716 sg00000177380 ppfia3-207 19 49128289 49137240 + lnc_RNA retained_intron
-209884 enst00000602492 sg00000177380 ppfia3-204 19 49128020 49130428 + lnc_RNA retained_intron
-210030 enst00000602351 sg00000177380 ppfia3-203 19 49127874 49151026 + mRNA protein_coding
-212553 enst00000602509 sg00000177380 ppfia3-205 19 49125351 49128945 + mRNA protein_coding
218146 enst00000596477 sg00000142546 nosip-205 19 49555718 49557295 - lnc_RNA retained_intron
-218240 enst00000602655 sg00000177380 ppfia3-206 19 49119664 49150279 + mRNA nonsense_mediated_decay
-218360 enst00000334186 sg00000177380 ppfia3-201 19 49119544 49151026 + mRNA protein_coding
-218761 enst00000408991 sg00000221916 c19orf73-201 19 49118402 49119143 - mRNA protein_coding
220888 enst00000601107 sg00000142546 nosip-215 19 49558433 49560037 - lnc_RNA retained_intron
220900 enst00000598550 sg00000142546 nosip-208 19 49556388 49560049 - lnc_RNA retained_intron
220901 enst00000599425 sg00000142546 nosip-211 19 49557273 49560050 - lnc_RNA retained_intron
221248 enst00000598839 sg00000142546 nosip-210 19 49557877 49560397 - lnc_RNA retained_intron
221481 enst00000601015 sg00000142546 nosip-214 19 49555711 49560630 - mRNA non_stop_decay
221542 enst00000598296 sg00000142546 nosip-206 19 49556583 49560691 - mRNA protein_coding
-221786 enst00000465141 sg00000104863 lin7b-203 19 49116118 49117995 + lnc_RNA retained_intron
-222678 enst00000474252 sg00000104863 lin7b-205 19 49115226 49118059 + lnc_RNA retained_intron
-223438 enst00000469137 sg00000104863 lin7b-204 19 49114466 49118460 + lnc_RNA retained_intron
-223480 enst00000486217 sg00000104863 lin7b-206 19 49114424 49115489 + mRNA protein_coding
-223495 enst00000595200 sg00000104863 lin7b-207 19 49114409 49118015 + mRNA nonsense_mediated_decay
-223534 enst00000221459 sg00000104863 lin7b-201 19 49114370 49118460 + mRNA protein_coding
-223580 enst00000391864 sg00000104863 lin7b-202 19 49114324 49118460 + mRNA protein_coding
227523 enst00000384345 sg00000207073 ac010619.1-201 19 49566672 49566772 + ncRNA misc_rna
-235493 enst00000544278 sg00000104852 snrnp70-203 19 49102411 49108602 + lnc_RNA retained_intron
240129 enst00000598544 sg00000142546 nosip-207 19 49557218 49579278 - mRNA protein_coding
241383 enst00000594932 sg00000142546 nosip-203 19 49556603 49580532 - mRNA nonsense_mediated_decay
241386 enst00000598820 sg00000142546 nosip-209 19 49555711 49580535 - lnc_RNA retained_intron
241398 enst00000593345 sg00000142546 nosip-202 19 49559211 49580547 - lnc_RNA retained_intron
241406 enst00000601340 sg00000142546 nosip-216 19 49555713 49580555 - lnc_RNA retained_intron
241407 enst00000600019 sg00000142546 nosip-213 19 49556979 49580556 - mRNA nonsense_mediated_decay
241407 enst00000596358 sg00000142546 nosip-204 19 49555468 49580556 - mRNA protein_coding
241409 enst00000339093 sg00000142546 nosip-201 19 49555711 49580558 - mRNA protein_coding
241497 enst00000596877 sg00000126460 prrg2-204 19 49580646 49583947 + mRNA protein_coding
242167 enst00000246794 sg00000126460 prrg2-201 19 49581316 49591004 + mRNA protein_coding
242198 enst00000596700 sg00000126460 prrg2-203 19 49581347 49590525 + lnc_RNA processed_transcript
242199 enst00000597121 sg00000126460 prrg2-205 19 49581348 49591004 + mRNA nonsense_mediated_decay
242224 enst00000543867 sg00000126460 prrg2-202 19 49581373 49591004 + lnc_RNA retained_intron
251113 enst00000599537 sg00000142546 nosip-212 19 49556549 49590262 - mRNA protein_coding
-251380 enst00000599687 sg00000104852 snrnp70-208 19 49086524 49101668 + lnc_RNA retained_intron
-251424 enst00000601411 sg00000104852 snrnp70-210 19 49086480 49098459 + mRNA protein_coding
252033 enst00000418929 sg00000126464 prr12-201 19 49591182 49626439 + mRNA protein_coding
-252409 enst00000595231 sg00000104852 snrnp70-204 19 49085495 49108605 + mRNA nonsense_mediated_decay
-252453 enst00000598441 sg00000104852 snrnp70-206 19 49085451 49108604 + mRNA protein_coding
-252453 enst00000401730 sg00000104852 snrnp70-202 19 49085451 49108603 + mRNA nonsense_mediated_decay
-252453 enst00000221448 sg00000104852 snrnp70-201 19 49085451 49108563 + mRNA protein_coding
-252453 enst00000597936 sg00000104852 snrnp70-205 19 49085451 49090639 + lnc_RNA retained_intron
-252481 enst00000598984 sg00000104852 snrnp70-207 19 49085423 49102118 + mRNA protein_coding
-252485 enst00000601065 sg00000104852 snrnp70-209 19 49085419 49108598 + mRNA nonsense_mediated_decay
256373 enst00000615927 sg00000126464 prr12-203 19 49595522 49626438 + mRNA protein_coding
-256572 enst00000580952 sg00000265675 rn7sl708p-201 19 49081332 49081630 + ncRNA misc_rna
-264963 enst00000221444 sg00000104848 kcna7-201 19 49067418 49072941 - mRNA protein_coding
-272828 enst00000599795 sg00000283663 ac008687.8-201 19 49055793 49065076 - mRNA nonsense_mediated_decay
-272850 enst00000595857 sg00000225950 ntf4-203 19 49061568 49065054 - mRNA protein_coding
-273063 enst00000594938 sg00000225950 ntf4-202 19 49063739 49064841 - lnc_RNA processed_transcript
-273645 enst00000599209 sg00000268287 ac008687.3-201 19 49064259 49064856 + lnc_RNA lncrna
-275907 enst00000593537 sg00000225950 ntf4-201 19 49061066 49061997 - mRNA protein_coding
-277291 enst00000597865 sg00000268108 ac008687.2-201 19 49060613 49061132 + lnc_RNA lncrna
-279044 enst00000597853 sg00000196337 cgb7-203 19 49054275 49058860 - mRNA protein_coding
-279143 enst00000598442 sg00000283251 ac008687.7-203 19 49057858 49058761 - lnc_RNA processed_transcript
-279159 enst00000637404 sg00000283251 ac008687.7-202 19 49056269 49058745 - pseudogenic_transcript transcribed_unprocessed_pseudogene
-280153 enst00000596965 sg00000196337 cgb7-202 19 49054275 49057751 - mRNA protein_coding
-280159 enst00000593309 sg00000283251 ac008687.7-201 19 49056088 49057745 - lnc_RNA processed_transcript
281300 enst00000593853 sg00000126464 prr12-202 19 49620449 49621760 + lnc_RNA retained_intron
-282125 enst00000377280 sg00000196337 cgb7-201 19 49054275 49055779 - mRNA protein_coding
-287058 enst00000596318 sg00000269706 ac008687.6-201 19 49050217 49050846 - pseudogenic_transcript unprocessed_pseudogene
287290 enst00000600665 sg00000268636 ac011495.2-201 19 49625994 49626439 - lnc_RNA lncrna
-288798 enst00000448456 sg00000213030 cgb8-201 19 49047638 49049106 - mRNA protein_coding
-294056 enst00000301408 sg00000189052 cgb5-201 19 49043848 49045311 + mRNA protein_coding
-295730 enst00000593746 sg00000268669 ac008687.5-201 19 49042174 49042731 + pseudogenic_transcript unprocessed_pseudogene
-298866 enst00000591913 sg00000267685 ntf6b-201 19 49038479 49039038 - pseudogenic_transcript unprocessed_pseudogene
300973 enst00000601532 sg00000126458 rras-202 19 49635812 49640122 - lnc_RNA retained_intron
300994 enst00000246792 sg00000126458 rras-201 19 49635292 49640143 - mRNA protein_coding
-301009 enst00000601167 sg00000267631 cgb1-202 19 49035653 49036895 - mRNA protein_coding
-301009 enst00000591656 sg00000267335 ac008687.1-201 19 49022953 49036895 - mRNA protein_coding
-301019 enst00000604577 sg00000267335 ac008687.1-202 19 49023146 49036885 - mRNA protein_coding
-301088 enst00000301407 sg00000267631 cgb1-201 19 49035610 49036816 - mRNA protein_coding
303060 enst00000360565 sg00000126461 scaf1-201 19 49642209 49658642 + mRNA protein_coding
303511 enst00000598359 sg00000126461 scaf1-203 19 49642660 49650998 + mRNA protein_coding
305681 enst00000601038 sg00000126461 scaf1-204 19 49644830 49646558 + mRNA protein_coding
305774 enst00000595242 sg00000126461 scaf1-202 19 49644923 49646619 + mRNA protein_coding
-305926 enst00000359342 sg00000104818 cgb2-201 19 49031978 49033238 + mRNA protein_coding
-305992 enst00000474913 sg00000104818 cgb2-202 19 49031912 49033154 + mRNA protein_coding
-308178 enst00000591094 sg00000267099 ntf6g-201 19 49029726 49030341 + pseudogenic_transcript unprocessed_pseudogene
-311884 enst00000591175 sg00000267019 ntf6a-201 19 49025461 49026020 - pseudogenic_transcript unprocessed_pseudogene
-313571 enst00000357383 sg00000104827 cgb3-201 19 49022869 49024333 - mRNA protein_coding
-317381 enst00000637680 sg00000268655 ac008687.4-201 19 49017496 49020523 - mRNA protein_coding
-318420 enst00000600007 sg00000268655 ac008687.4-202 19 49018247 49019484 - lnc_RNA processed_transcript
-320814 enst00000649238 sg00000104826 lhb-201 19 49015980 49017090 - mRNA protein_coding
-321084 enst00000649284 sg00000104826 lhb-202 19 49016075 49016820 - lnc_RNA retained_intron
321854 enst00000596644 sg00000126456 irf3-211 19 49659575 49661003 - lnc_RNA retained_intron
322375 enst00000599680 sg00000126456 irf3-224 19 49659569 49661524 - lnc_RNA processed_transcript
-322653 enst00000595002 sg00000183207 ruvbl2-205 19 49015251 49015926 + lnc_RNA retained_intron
323180 enst00000602190 sg00000126456 irf3-231 19 49661595 49662329 - lnc_RNA processed_transcript
324720 enst00000597369 sg00000126456 irf3-218 19 49663236 49663869 - lnc_RNA retained_intron
325374 enst00000595240 sg00000126456 irf3-210 19 49662375 49664523 - lnc_RNA retained_intron
325574 enst00000596788 sg00000126456 irf3-214 19 49662585 49664723 - mRNA nonsense_mediated_decay
325689 enst00000442265 sg00000126456 irf3-204 19 49662539 49664838 - mRNA protein_coding
325993 enst00000616144 sg00000126453 bcl2l12-212 19 49665142 49673915 + mRNA protein_coding
325993 enst00000614495 sg00000126453 bcl2l12-211 19 49665142 49673915 + mRNA protein_coding
325993 enst00000611631 sg00000126453 bcl2l12-210 19 49665142 49673915 + mRNA protein_coding
325993 enst00000619007 sg00000126453 bcl2l12-213 19 49665142 49673915 + mRNA protein_coding
326020 enst00000309877 sg00000126456 irf3-201 19 49659572 49665169 - mRNA protein_coding
326082 enst00000600911 sg00000126456 irf3-227 19 49659572 49665231 - mRNA protein_coding
326417 enst00000441864 sg00000126453 bcl2l12-203 19 49665566 49673859 + mRNA protein_coding
326417 enst00000246785 sg00000126453 bcl2l12-202 19 49665566 49673916 + mRNA protein_coding
326464 enst00000596756 sg00000126456 irf3-212 19 49659758 49665613 - mRNA protein_coding
326556 enst00000600022 sg00000126456 irf3-225 19 49659579 49665705 - mRNA protein_coding
326556 enst00000599223 sg00000126456 irf3-223 19 49659579 49665705 - mRNA protein_coding
326556 enst00000596765 sg00000126456 irf3-213 19 49659579 49665705 - mRNA protein_coding
326556 enst00000593922 sg00000126456 irf3-207 19 49659579 49665705 - mRNA protein_coding
326582 enst00000599144 sg00000126456 irf3-222 19 49659579 49665731 - mRNA protein_coding
326605 enst00000597180 sg00000126456 irf3-216 19 49663421 49665754 - lnc_RNA processed_transcript
326606 enst00000596822 sg00000126456 irf3-215 19 49659572 49665755 - mRNA protein_coding
326630 enst00000598108 sg00000126456 irf3-220 19 49662069 49665779 - mRNA protein_coding
326631 enst00000594387 sg00000126456 irf3-208 19 49662427 49665780 - lnc_RNA retained_intron
326635 enst00000601373 sg00000126456 irf3-229 19 49662239 49665784 - mRNA protein_coding
326639 enst00000595034 sg00000126456 irf3-209 19 49662133 49665788 - mRNA protein_coding
326653 enst00000601291 sg00000126456 irf3-228 19 49659572 49665802 - mRNA protein_coding
326686 enst00000593337 sg00000126456 irf3-205 19 49662301 49665835 - mRNA protein_coding
326693 enst00000598808 sg00000126456 irf3-221 19 49659632 49665842 - mRNA protein_coding
326694 enst00000600453 sg00000126456 irf3-226 19 49663373 49665843 - mRNA protein_coding
326698 enst00000593818 sg00000126456 irf3-206 19 49662175 49665847 - mRNA protein_coding
326708 enst00000597198 sg00000126456 irf3-217 19 49659573 49665857 - mRNA protein_coding
326708 enst00000597636 sg00000126456 irf3-219 19 49659575 49665857 - mRNA nonsense_mediated_decay
326708 enst00000377139 sg00000126456 irf3-203 19 49659572 49665857 - mRNA protein_coding
326710 enst00000601809 sg00000126456 irf3-230 19 49662454 49665859 - mRNA protein_coding
326726 enst00000377135 sg00000126456 irf3-202 19 49659570 49665875 - mRNA protein_coding
326812 enst00000594157 sg00000126453 bcl2l12-204 19 49665961 49673916 + mRNA protein_coding
326812 enst00000598979 sg00000126453 bcl2l12-207 19 49665961 49673916 + mRNA nonsense_mediated_decay
326849 enst00000601168 sg00000126453 bcl2l12-209 19 49665998 49667030 + lnc_RNA retained_intron
326850 enst00000600947 sg00000126453 bcl2l12-208 19 49665999 49673916 + mRNA protein_coding
326858 enst00000246784 sg00000126453 bcl2l12-201 19 49666007 49673916 + mRNA protein_coding
326864 enst00000598306 sg00000126453 bcl2l12-206 19 49666013 49673916 + mRNA protein_coding
-327998 enst00000612887 sg00000273898 mir6798-201 19 49009906 49009972 + miRNA mirna
332960 enst00000594793 sg00000126453 bcl2l12-205 19 49672109 49673915 + lnc_RNA processed_transcript
-333615 enst00000627972 sg00000183207 ruvbl2-212 19 49004289 49015650 + mRNA protein_coding
336637 enst00000529284 sg00000126457 prmt1-212 19 49675786 49684816 + mRNA protein_coding
336748 enst00000532489 sg00000126457 prmt1-217 19 49675897 49688447 + mRNA protein_coding
337077 enst00000527382 sg00000126457 prmt1-207 19 49676226 49685032 + mRNA protein_coding
337092 enst00000528623 sg00000126457 prmt1-211 19 49676241 49681979 + mRNA protein_coding
337924 enst00000534465 sg00000126457 prmt1-219 19 49677073 49685037 + mRNA protein_coding
338003 enst00000610806 sg00000126457 prmt1-221 19 49677152 49688450 + mRNA protein_coding
338003 enst00000391851 sg00000126457 prmt1-201 19 49677152 49688447 + mRNA protein_coding
338024 enst00000534280 sg00000126457 prmt1-218 19 49677173 49684069 + mRNA nonsense_mediated_decay
338100 enst00000534676 sg00000126457 prmt1-220 19 49677249 49685215 + lnc_RNA retained_intron
338118 enst00000525915 sg00000126457 prmt1-205 19 49677267 49680119 + lnc_RNA retained_intron
338123 enst00000454376 sg00000126457 prmt1-202 19 49677272 49688447 + mRNA protein_coding
338128 enst00000525616 sg00000126457 prmt1-204 19 49677277 49685028 + lnc_RNA retained_intron
338145 enst00000524771 sg00000126457 prmt1-203 19 49677294 49684962 + mRNA protein_coding
338353 enst00000529836 sg00000126457 prmt1-214 19 49677502 49682249 + mRNA protein_coding
-338585 enst00000594338 sg00000183207 ruvbl2-204 19 48999319 49015894 + lnc_RNA retained_intron
-338597 enst00000640699 sg00000183207 ruvbl2-214 19 48999307 49004236 + mRNA protein_coding
-338597 enst00000639391 sg00000183207 ruvbl2-213 19 48999307 49001401 + mRNA protein_coding
339076 enst00000526224 sg00000126457 prmt1-206 19 49678225 49684818 + mRNA protein_coding
340626 enst00000527412 sg00000126457 prmt1-208 19 49679775 49682249 + lnc_RNA retained_intron
342968 enst00000615402 sg00000274306 mir5088-201 19 49682117 49682195 + miRNA mirna
-343994 enst00000593570 sg00000183207 ruvbl2-202 19 48993910 49009882 + mRNA nonsense_mediated_decay
-344005 enst00000221413 sg00000183207 ruvbl2-201 19 48993899 49015926 + mRNA nonsense_mediated_decay
-344006 enst00000596247 sg00000183207 ruvbl2-208 19 48993898 49015929 + mRNA nonsense_mediated_decay
-344006 enst00000598768 sg00000183207 ruvbl2-210 19 48993898 48999364 + lnc_RNA processed_transcript
-344014 enst00000594017 sg00000183207 ruvbl2-203 19 48993890 49010340 + lnc_RNA retained_intron
-344015 enst00000595811 sg00000183207 ruvbl2-207 19 48993889 49004382 + mRNA nonsense_mediated_decay
-344017 enst00000595090 sg00000183207 ruvbl2-206 19 48993887 49015970 + mRNA protein_coding
-344288 enst00000596837 sg00000183207 ruvbl2-209 19 48993616 49007368 + mRNA protein_coding
-344342 enst00000601968 sg00000183207 ruvbl2-211 19 48993562 49015892 + mRNA protein_coding
344486 enst00000529650 sg00000126457 prmt1-213 19 49683635 49684797 + lnc_RNA retained_intron
-344594 enst00000263276 sg00000104812 gys1-201 19 48968130 48993310 - mRNA protein_coding
-344595 enst00000323798 sg00000104812 gys1-202 19 48968130 48993309 - mRNA protein_coding
-344621 enst00000457974 sg00000104812 gys1-203 19 48987194 48993283 - lnc_RNA processed_transcript
345678 enst00000530070 sg00000126457 prmt1-215 19 49684827 49685555 + lnc_RNA processed_transcript
346156 enst00000530361 sg00000126457 prmt1-216 19 49685305 49688419 + lnc_RNA processed_transcript
346575 enst00000528126 sg00000126457 prmt1-210 19 49685724 49686726 + lnc_RNA retained_intron
348704 enst00000527866 sg00000126457 prmt1-209 19 49687853 49689029 + lnc_RNA processed_transcript
349515 enst00000420022 sg00000224420 adm5-201 19 49688664 49690575 + mRNA protein_coding
351424 enst00000596472 sg00000268677 ac011495.3-201 19 49688853 49690573 - lnc_RNA lncrna
351749 enst00000594038 sg00000169169 cpt1c-205 19 49690898 49697383 + mRNA nonsense_mediated_decay
351961 enst00000323446 sg00000169169 cpt1c-202 19 49691110 49713731 + mRNA protein_coding
351963 enst00000598259 sg00000169169 cpt1c-216 19 49691112 49713043 + mRNA nonsense_mediated_decay
351967 enst00000599023 sg00000169169 cpt1c-221 19 49691116 49711065 + lnc_RNA retained_intron
351967 enst00000392518 sg00000169169 cpt1c-203 19 49691116 49713731 + mRNA protein_coding
351987 enst00000598293 sg00000169169 cpt1c-217 19 49691136 49713672 + mRNA protein_coding
351987 enst00000598396 sg00000169169 cpt1c-218 19 49691136 49704787 + mRNA protein_coding
351990 enst00000598714 sg00000169169 cpt1c-220 19 49691139 49696583 + lnc_RNA processed_transcript
351995 enst00000405931 sg00000169169 cpt1c-204 19 49691144 49713731 + mRNA protein_coding
351999 enst00000600944 sg00000169169 cpt1c-223 19 49691148 49697935 + lnc_RNA retained_intron
351999 enst00000596922 sg00000169169 cpt1c-213 19 49691148 49700694 + mRNA nonsense_mediated_decay
352004 enst00000602019 sg00000169169 cpt1c-224 19 49691153 49700689 + mRNA protein_coding
352415 enst00000594587 sg00000169169 cpt1c-207 19 49691564 49701396 + mRNA protein_coding
-352430 enst00000484289 sg00000104812 gys1-205 19 48981431 48985474 - lnc_RNA retained_intron
352440 enst00000595969 sg00000169169 cpt1c-211 19 49691589 49701503 + mRNA protein_coding
352443 enst00000595568 sg00000169169 cpt1c-209 19 49691592 49705964 + mRNA nonsense_mediated_decay
352489 enst00000295404 sg00000169169 cpt1c-201 19 49691638 49710631 + lnc_RNA retained_intron
-359671 enst00000496048 sg00000104812 gys1-206 19 48970944 48978233 - lnc_RNA retained_intron
-359918 enst00000472004 sg00000104812 gys1-204 19 48970750 48977986 - lnc_RNA retained_intron
362433 enst00000596701 sg00000169169 cpt1c-212 19 49701582 49712343 + lnc_RNA retained_intron
365538 enst00000594431 sg00000169169 cpt1c-206 19 49704687 49706073 + lnc_RNA retained_intron
366930 enst00000595031 sg00000169169 cpt1c-208 19 49706079 49713731 + mRNA protein_coding
-367195 enst00000594220 sg00000104812 gys1-207 19 48970283 48970709 - mRNA protein_coding
372415 enst00000595901 sg00000169169 cpt1c-210 19 49711564 49713626 + lnc_RNA retained_intron
-372595 enst00000331825 sg00000087086 ftl-201 19 48965309 48966879 + mRNA protein_coding
373406 enst00000599937 sg00000169169 cpt1c-222 19 49712555 49713731 + lnc_RNA retained_intron
373479 enst00000598647 sg00000169169 cpt1c-219 19 49712628 49713731 + lnc_RNA retained_intron
373570 enst00000598072 sg00000169169 cpt1c-215 19 49712719 49713724 + lnc_RNA retained_intron
373844 enst00000597099 sg00000169169 cpt1c-214 19 49712993 49713731 + mRNA protein_coding
-373914 enst00000594305 sg00000267898 ac026803.2-202 19 48963990 48965029 + lnc_RNA lncrna
-373929 enst00000599784 sg00000267898 ac026803.2-201 19 48963975 48965158 + lnc_RNA lncrna
380932 enst00000498085 sg00000243829 ac011495.1-201 19 49719498 49720081 - pseudogenic_transcript processed_pseudogene
-382051 enst00000513217 sg00000087088 bax-210 19 48955853 48961197 + lnc_RNA retained_intron
-382396 enst00000503726 sg00000087088 bax-208 19 48955508 48960835 + lnc_RNA retained_intron
-382975 enst00000515540 sg00000087088 bax-212 19 48954929 48956316 + mRNA nonsense_mediated_decay
-382975 enst00000539787 sg00000087088 bax-213 19 48954929 48961097 + mRNA protein_coding
-382975 enst00000356483 sg00000087088 bax-204 19 48954929 48961636 + mRNA nonsense_mediated_decay
-382975 enst00000293288 sg00000087088 bax-201 19 48954929 48961798 + mRNA protein_coding
-382975 enst00000354470 sg00000087088 bax-203 19 48954929 48961637 + mRNA protein_coding
-382975 enst00000506183 sg00000087088 bax-209 19 48954929 48961639 + mRNA protein_coding
-382975 enst00000391871 sg00000087088 bax-205 19 48954929 48961795 + mRNA protein_coding
-382975 enst00000415969 sg00000087088 bax-206 19 48954929 48961636 + mRNA protein_coding
-383007 enst00000513545 sg00000087088 bax-211 19 48954897 48961713 + lnc_RNA retained_intron
-383029 enst00000345358 sg00000087088 bax-202 19 48954875 48961798 + mRNA protein_coding
-383089 enst00000502487 sg00000087088 bax-207 19 48954815 48961704 + lnc_RNA retained_intron
401182 enst00000599325 sg00000126467 tsks-203 19 49739753 49740331 - lnc_RNA retained_intron
-404146 enst00000520557 sg00000104808 dhdh-202 19 48933758 48944968 + mRNA nonsense_mediated_decay
-404199 enst00000522614 sg00000104808 dhdh-203 19 48933705 48944963 + mRNA protein_coding
-404202 enst00000523250 sg00000104808 dhdh-204 19 48933702 48944959 + mRNA protein_coding
-404205 enst00000221403 sg00000104808 dhdh-201 19 48933699 48944969 + mRNA protein_coding
408229 enst00000358830 sg00000126467 tsks-202 19 49739757 49747378 - mRNA protein_coding
-411733 enst00000569130 sg00000260366 ac026803.1-201 19 48926171 48926444 + lnc_RNA lncrna
-418904 enst00000492367 sg00000104805 nucb1-212 19 48919000 48923268 + lnc_RNA retained_intron
-419013 enst00000416432 sg00000235191 nucb1-as1-201 19 48910930 48918891 - lnc_RNA lncrna
-419159 enst00000469291 sg00000104805 nucb1-210 19 48918745 48921264 + lnc_RNA retained_intron
-419528 enst00000460125 sg00000104805 nucb1-208 19 48918376 48919148 + lnc_RNA retained_intron
424157 enst00000246801 sg00000126467 tsks-201 19 49739760 49763306 - mRNA protein_coding
425481 enst00000383872 sg00000206599 rnu6-841p-201 19 49764524 49764630 - snRNA snrna
-426686 enst00000465524 sg00000104805 nucb1-209 19 48911218 48921866 + lnc_RNA retained_intron
427819 enst00000354293 sg00000196961 ap2a1-201 19 49766968 49807112 + mRNA protein_coding
427858 enst00000600199 sg00000196961 ap2a1-206 19 49767007 49797562 + lnc_RNA processed_transcript
427985 enst00000359032 sg00000196961 ap2a1-202 19 49767134 49807110 + mRNA protein_coding
427987 enst00000597774 sg00000196961 ap2a1-205 19 49767136 49806791 + mRNA nonsense_mediated_decay
-437106 enst00000424608 sg00000104805 nucb1-204 19 48900798 48919259 + mRNA protein_coding
-437338 enst00000451312 sg00000104805 nucb1-206 19 48900566 48905841 + mRNA protein_coding
-437534 enst00000411700 sg00000104805 nucb1-203 19 48900370 48905882 + mRNA protein_coding
-437549 enst00000443560 sg00000104805 nucb1-205 19 48900355 48905841 + mRNA nonsense_mediated_decay
-437565 enst00000485798 sg00000104805 nucb1-211 19 48900339 48922944 + lnc_RNA processed_transcript
-437581 enst00000452087 sg00000104805 nucb1-207 19 48900323 48918744 + mRNA protein_coding
-437584 enst00000407032 sg00000104805 nucb1-202 19 48900320 48923271 + mRNA protein_coding
-437592 enst00000405315 sg00000104805 nucb1-201 19 48900312 48923372 + mRNA protein_coding
-439160 enst00000221399 sg00000104804 tulp2-201 19 48880967 48898744 - mRNA protein_coding
-439271 enst00000518572 sg00000104804 tulp2-202 19 48888068 48898633 - mRNA protein_coding
-439522 enst00000522945 sg00000104804 tulp2-206 19 48888258 48898382 - mRNA protein_coding
-440445 enst00000520977 sg00000104804 tulp2-203 19 48889528 48897459 - mRNA protein_coding
-441165 enst00000522229 sg00000104804 tulp2-204 19 48895375 48896739 - lnc_RNA retained_intron
452717 enst00000620297 sg00000276270 mir6799-201 19 49791866 49791934 + miRNA mirna
-455779 enst00000522341 sg00000104804 tulp2-205 19 48880971 48882125 - mRNA protein_coding
461543 enst00000593788 sg00000196961 ap2a1-203 19 49800692 49801733 + lnc_RNA retained_intron
462398 enst00000600466 sg00000196961 ap2a1-207 19 49801547 49804540 + lnc_RNA retained_intron
463373 enst00000594838 sg00000196961 ap2a1-204 19 49802522 49805933 + lnc_RNA retained_intron
-463586 enst00000600406 sg00000087074 ppp1r15a-202 19 48874318 48876042 + mRNA protein_coding
-465483 enst00000200453 sg00000087074 ppp1r15a-201 19 48872421 48876058 + mRNA protein_coding
465727 enst00000601356 sg00000196961 ap2a1-208 19 49804876 49807113 + lnc_RNA retained_intron
-469287 enst00000263265 sg00000105559 plekha4-201 19 48837097 48868617 - mRNA protein_coding
-469450 enst00000355496 sg00000105559 plekha4-202 19 48837097 48868454 - mRNA protein_coding
469490 enst00000529634 sg00000010361 fuz-214 19 49806885 49808639 - mRNA protein_coding
469676 enst00000534138 sg00000010361 fuz-218 19 49808123 49808825 - lnc_RNA retained_intron
469784 enst00000600669 sg00000269194 ac006942.1-201 19 49808933 49809738 + lnc_RNA lncrna
-470309 enst00000594100 sg00000105559 plekha4-204 19 48859097 48867595 - mRNA protein_coding
470716 enst00000527973 sg00000010361 fuz-210 19 49808619 49809865 - lnc_RNA processed_transcript
-472347 enst00000596982 sg00000105559 plekha4-208 19 48859097 48865557 - mRNA nonsense_mediated_decay
474007 enst00000525370 sg00000010361 fuz-204 19 49806893 49813156 - mRNA nonsense_mediated_decay
474026 enst00000528094 sg00000010361 fuz-212 19 49806890 49813175 - mRNA protein_coding
474029 enst00000526575 sg00000010361 fuz-207 19 49811384 49813178 - mRNA protein_coding
474041 enst00000525130 sg00000010361 fuz-203 19 49806869 49813190 - mRNA nonsense_mediated_decay
474086 enst00000525800 sg00000010361 fuz-205 19 49811431 49813235 - mRNA nonsense_mediated_decay
474092 enst00000534008 sg00000010361 fuz-217 19 49811365 49813241 - lnc_RNA processed_transcript
474100 enst00000528043 sg00000010361 fuz-211 19 49809395 49813249 - mRNA nonsense_mediated_decay
474100 enst00000533418 sg00000010361 fuz-216 19 49806890 49813249 - mRNA protein_coding
474124 enst00000377092 sg00000010361 fuz-202 19 49806920 49813273 - mRNA nonsense_mediated_decay
474135 enst00000526435 sg00000010361 fuz-206 19 49812280 49813284 - mRNA nonsense_mediated_decay
474137 enst00000527585 sg00000010361 fuz-209 19 49811363 49813286 - mRNA nonsense_mediated_decay
474143 enst00000313777 sg00000010361 fuz-201 19 49806866 49813292 - mRNA protein_coding
474150 enst00000527111 sg00000010361 fuz-208 19 49812251 49813299 - mRNA nonsense_mediated_decay
474160 enst00000531017 sg00000010361 fuz-215 19 49811036 49813309 - lnc_RNA retained_intron
-477786 enst00000596713 sg00000105559 plekha4-207 19 48858861 48860118 - lnc_RNA processed_transcript
478227 enst00000529302 sg00000010361 fuz-213 19 49811381 49817376 - mRNA protein_coding
-478522 enst00000595867 sg00000105559 plekha4-206 19 48845551 48859382 - mRNA protein_coding
-478530 enst00000594195 sg00000105559 plekha4-205 19 48852238 48859374 - mRNA protein_coding
479130 enst00000622402 sg00000104973 med25-214 19 49818279 49836980 + mRNA protein_coding
479130 enst00000620467 sg00000104973 med25-213 19 49818279 49836980 + mRNA protein_coding
479130 enst00000612854 sg00000104973 med25-210 19 49818279 49836980 + mRNA protein_coding
479130 enst00000617849 sg00000104973 med25-211 19 49818279 49836980 + mRNA protein_coding
479133 enst00000593595 sg00000104973 med25-203 19 49818282 49818882 + lnc_RNA retained_intron
479140 enst00000593636 sg00000104973 med25-204 19 49818289 49819950 + lnc_RNA retained_intron
479140 enst00000312865 sg00000104973 med25-201 19 49818289 49836979 + mRNA protein_coding
479140 enst00000593767 sg00000104973 med25-205 19 49818289 49840383 + mRNA protein_coding
479193 enst00000618715 sg00000104973 med25-212 19 49818342 49836962 + mRNA protein_coding
479193 enst00000538643 sg00000104973 med25-202 19 49818342 49836962 + mRNA protein_coding
479193 enst00000595185 sg00000104973 med25-207 19 49818342 49836962 + mRNA protein_coding
479193 enst00000612791 sg00000104973 med25-209 19 49818342 49836962 + mRNA protein_coding
-485598 enst00000597406 sg00000105559 plekha4-210 19 48845193 48852306 - lnc_RNA retained_intron
491694 enst00000599722 sg00000104973 med25-208 19 49830843 49832415 + lnc_RNA retained_intron
-492308 enst00000593696 sg00000105559 plekha4-203 19 48845141 48845596 - lnc_RNA retained_intron
-492353 enst00000597129 sg00000105559 plekha4-209 19 48837110 48845551 - mRNA protein_coding
492869 enst00000614963 sg00000284114 mir6800-201 19 49832018 49832099 + miRNA mirna
493735 enst00000594998 sg00000104973 med25-206 19 49832884 49836979 + lnc_RNA retained_intron
-499590 enst00000601146 sg00000105559 plekha4-211 19 48837183 48838314 - lnc_RNA retained_intron

Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz

MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc