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CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #137 | 1 | 16646922 | 16648717 | 1795 | 3 | 63 | 3.28048e-16 | 2.38134e-14 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| -1300 | enst00000457982 | sg00000186301 | mst1p2-201 | 1 | 16645622 | 16650289 | + | pseudogenic_transcript | unprocessed_pseudogene |
| -2236 | enst00000639456 | sg00000215908 | croccp2-204 | 1 | 16618273 | 16644686 | - | lnc_RNA | processed_transcript |
| -2239 | enst00000362058 | sg00000215908 | croccp2-201 | 1 | 16629670 | 16644683 | - | lnc_RNA | processed_transcript |
| -2250 | enst00000635081 | sg00000215908 | croccp2-203 | 1 | 16625375 | 16644672 | - | lnc_RNA | processed_transcript |
| -3813 | enst00000639399 | sg00000283773 | al137798.3-201 | 1 | 16642767 | 16643109 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| 8162 | enst00000633763 | sg00000282143 | al137798.2-201 | 1 | 16656879 | 16667524 | + | lnc_RNA | lncrna |
| 8515 | enst00000412962 | sg00000215908 | croccp2-202 | 1 | 16618969 | 16657232 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| -15813 | enst00000639594 | sg00000215908 | croccp2-206 | 1 | 16618256 | 16631109 | - | lnc_RNA | processed_transcript |
| 18231 | enst00000384782 | sg00000207513 | rnu1-3-201 | 1 | 16666785 | 16666948 | - | snRNA | snrna |
| -18270 | enst00000640476 | sg00000215908 | croccp2-207 | 1 | 16618256 | 16628652 | - | lnc_RNA | processed_transcript |
| -20536 | enst00000639481 | sg00000215908 | croccp2-205 | 1 | 16618253 | 16626386 | - | lnc_RNA | processed_transcript |
| -29531 | enst00000607700 | sg00000271732 | al137798.1-201 | 1 | 16617391 | 16617729 | + | lnc_RNA | lncrna |
| -33360 | enst00000599069 | sg00000219481 | nbpf1-206 | 1 | 16599589 | 16613562 | - | lnc_RNA | processed_transcript |
| -33388 | enst00000449853 | sg00000219481 | nbpf1-205 | 1 | 16605406 | 16613534 | - | lnc_RNA | processed_transcript |
| -33435 | enst00000432949 | sg00000219481 | nbpf1-204 | 1 | 16564018 | 16613487 | - | mRNA | protein_coding |
| -33435 | enst00000430580 | sg00000219481 | nbpf1-203 | 1 | 16562319 | 16613487 | - | mRNA | protein_coding |
| 37338 | enst00000419267 | sg00000236698 | eif1axp1-201 | 1 | 16685621 | 16686055 | - | pseudogenic_transcript | processed_pseudogene |
| -38272 | enst00000420513 | sg00000219481 | nbpf1-202 | 1 | 16593562 | 16608650 | - | lnc_RNA | processed_transcript |
| 40032 | enst00000624828 | sg00000280114 | al021920.2-201 | 1 | 16681097 | 16688749 | - | pseudogenic_transcript | unprocessed_pseudogene |
| -41988 | enst00000392963 | sg00000219481 | nbpf1-201 | 1 | 16564853 | 16604934 | - | mRNA | nonsense_mediated_decay |
| 43592 | enst00000414828 | sg00000268869 | espnp-202 | 1 | 16687339 | 16692309 | - | lnc_RNA | processed_transcript |
| -43873 | enst00000599908 | sg00000219481 | nbpf1-207 | 1 | 16599603 | 16603049 | - | lnc_RNA | processed_transcript |
| 52829 | enst00000624517 | sg00000279151 | al021920.1-201 | 1 | 16701546 | 16705594 | + | lnc_RNA | lncrna |
| 61902 | enst00000492551 | sg00000268869 | espnp-203 | 1 | 16706924 | 16710619 | - | lnc_RNA | processed_transcript |
| 71440 | enst00000270691 | sg00000268869 | espnp-201 | 1 | 16692280 | 16720157 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| 91556 | enst00000466256 | sg00000058453 | crocc-205 | 1 | 16740273 | 16941434 | + | lnc_RNA | processed_transcript |
| 91563 | enst00000633627 | sg00000227684 | croccp4-202 | 1 | 16740280 | 16750968 | + | lnc_RNA | processed_transcript |
| 91799 | enst00000384659 | sg00000207389 | rnu1-4-201 | 1 | 16740516 | 16740679 | + | snRNA | snrna |
| -94391 | enst00000438396 | sg00000225710 | al355149.1-201 | 1 | 16548651 | 16552531 | - | pseudogenic_transcript | unprocessed_pseudogene |
| 101516 | enst00000457096 | sg00000227684 | croccp4-201 | 1 | 16750233 | 16750964 | + | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| 101872 | enst00000633433 | sg00000282740 | al021920.3-201 | 1 | 16739938 | 16750589 | - | lnc_RNA | lncrna |
| 110106 | enst00000544155 | sg00000186715 | mst1l-203 | 1 | 16758053 | 16758823 | - | lnc_RNA | retained_intron |
| 110155 | enst00000455405 | sg00000186715 | mst1l-202 | 1 | 16754910 | 16758872 | - | lnc_RNA | processed_transcript |
| 110574 | enst00000650268 | sg00000186715 | mst1l-206 | 1 | 16757128 | 16759291 | - | lnc_RNA | retained_intron |
| -110750 | enst00000614408 | sg00000233421 | linc01783-202 | 1 | 16535342 | 16536172 | - | pseudogenic_transcript | pseudogene |
| -111273 | enst00000415386 | sg00000233421 | linc01783-201 | 1 | 16533886 | 16535649 | - | lnc_RNA | lncrna |
| -112698 | enst00000516290 | sg00000277344 | rnu1-6p-201 | 1 | 16534081 | 16534224 | - | snRNA | snrna |
| 115763 | enst00000624762 | sg00000186715 | mst1l-205 | 1 | 16755307 | 16764480 | - | lnc_RNA | processed_transcript |
| 115763 | enst00000442552 | sg00000186715 | mst1l-201 | 1 | 16757232 | 16764480 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| 121520 | enst00000545160 | sg00000186715 | mst1l-204 | 1 | 16760837 | 16770237 | - | lnc_RNA | processed_transcript |
| -126228 | enst00000452795 | sg00000224174 | al137802.1-201 | 1 | 16520694 | 16521796 | + | lnc_RNA | lncrna |
| -131888 | enst00000648419 | sg00000285853 | al137802.3-201 | 1 | 16515034 | 16521788 | + | lnc_RNA | lncrna |
| -132277 | enst00000562878 | sg00000261135 | al137802.2-201 | 1 | 16514645 | 16515754 | + | lnc_RNA | lncrna |
| -132637 | enst00000383925 | sg00000206652 | rnu1-1-201 | 1 | 16514122 | 16514285 | - | snRNA | snrna |
| -147665 | enst00000590118 | sg00000080947 | croccp3-204 | 1 | 16490634 | 16499257 | - | lnc_RNA | processed_transcript |
| -147665 | enst00000589964 | sg00000080947 | croccp3-203 | 1 | 16490646 | 16499257 | - | lnc_RNA | processed_transcript |
| -154221 | enst00000263511 | sg00000080947 | croccp3-201 | 1 | 16467436 | 16492701 | - | lnc_RNA | processed_transcript |
| -155615 | enst00000420820 | sg00000080947 | croccp3-202 | 1 | 16474396 | 16491307 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| -155840 | enst00000591348 | sg00000080947 | croccp3-206 | 1 | 16468922 | 16491082 | - | lnc_RNA | processed_transcript |
| -163581 | enst00000591316 | sg00000080947 | croccp3-205 | 1 | 16476930 | 16483341 | - | lnc_RNA | retained_intron |
| -185974 | enst00000457898 | sg00000226029 | linc01772-201 | 1 | 16460948 | 16468481 | + | lnc_RNA | lncrna |
| -191401 | enst00000509727 | sg00000157191 | necap2-211 | 1 | 16455521 | 16459018 | + | lnc_RNA | retained_intron |
| 204082 | enst00000414340 | sg00000223643 | bx284668.1-201 | 1 | 16851257 | 16852799 | - | lnc_RNA | lncrna |
| 204412 | enst00000422345 | sg00000223643 | bx284668.1-202 | 1 | 16851321 | 16853129 | - | lnc_RNA | lncrna |
| -206150 | enst00000513161 | sg00000157191 | necap2-212 | 1 | 16440772 | 16459008 | + | mRNA | nonsense_mediated_decay |
| -206164 | enst00000496239 | sg00000157191 | necap2-207 | 1 | 16440758 | 16460077 | + | lnc_RNA | retained_intron |
| -206166 | enst00000459640 | sg00000157191 | necap2-204 | 1 | 16440756 | 16458956 | + | mRNA | nonsense_mediated_decay |
| -206179 | enst00000492095 | sg00000157191 | necap2-206 | 1 | 16440743 | 16460077 | + | mRNA | nonsense_mediated_decay |
| -206180 | enst00000508680 | sg00000157191 | necap2-210 | 1 | 16440742 | 16448350 | + | lnc_RNA | processed_transcript |
| -206185 | enst00000504858 | sg00000157191 | necap2-209 | 1 | 16440737 | 16452015 | + | mRNA | nonsense_mediated_decay |
| -206186 | enst00000443980 | sg00000157191 | necap2-202 | 1 | 16440736 | 16460077 | + | mRNA | protein_coding |
| -206186 | enst00000486390 | sg00000157191 | necap2-205 | 1 | 16440736 | 16441619 | + | lnc_RNA | processed_transcript |
| -206198 | enst00000457722 | sg00000157191 | necap2-203 | 1 | 16440724 | 16459073 | + | mRNA | protein_coding |
| -206198 | enst00000337132 | sg00000157191 | necap2-201 | 1 | 16440724 | 16460078 | + | mRNA | protein_coding |
| -206201 | enst00000504551 | sg00000157191 | necap2-208 | 1 | 16440721 | 16459008 | + | mRNA | protein_coding |
| 206690 | enst00000414128 | sg00000230239 | bx284668.3-201 | 1 | 16855407 | 16859284 | + | pseudogenic_transcript | unprocessed_pseudogene |
| -209498 | enst00000335496 | sg00000187144 | spata21-201 | 1 | 16398643 | 16437424 | - | mRNA | protein_coding |
| -209506 | enst00000375577 | sg00000187144 | spata21-202 | 1 | 16424904 | 16437416 | - | mRNA | protein_coding |
| -209529 | enst00000466212 | sg00000187144 | spata21-203 | 1 | 16395681 | 16437393 | - | lnc_RNA | processed_transcript |
| -209732 | enst00000540400 | sg00000187144 | spata21-205 | 1 | 16398667 | 16437190 | - | mRNA | protein_coding |
| 210304 | enst00000583661 | sg00000263811 | mir3675-201 | 1 | 16858949 | 16859021 | - | miRNA | mirna |
| -215551 | enst00000612240 | sg00000187144 | spata21-206 | 1 | 16425097 | 16431371 | - | mRNA | protein_coding |
| 222228 | enst00000438002 | sg00000228549 | bx284668.2-201 | 1 | 16870945 | 16874079 | + | lnc_RNA | lncrna |
| 223044 | enst00000619677 | sg00000228549 | bx284668.2-210 | 1 | 16871761 | 16872591 | + | pseudogenic_transcript | pseudogene |
| 223509 | enst00000662795 | sg00000228549 | bx284668.2-209 | 1 | 16872226 | 16874048 | + | lnc_RNA | lncrna |
| 223509 | enst00000668460 | sg00000228549 | bx284668.2-208 | 1 | 16872226 | 16874024 | + | lnc_RNA | lncrna |
| 223541 | enst00000451828 | sg00000228549 | bx284668.2-202 | 1 | 16872258 | 16874041 | + | lnc_RNA | lncrna |
| 223564 | enst00000660907 | sg00000228549 | bx284668.2-205 | 1 | 16872281 | 16883659 | + | lnc_RNA | lncrna |
| 223567 | enst00000453554 | sg00000228549 | bx284668.2-203 | 1 | 16872284 | 16874044 | + | lnc_RNA | lncrna |
| 223842 | enst00000666785 | sg00000228549 | bx284668.2-207 | 1 | 16872559 | 16874081 | + | lnc_RNA | lncrna |
| 224322 | enst00000457856 | sg00000228549 | bx284668.2-204 | 1 | 16873039 | 16874092 | + | lnc_RNA | lncrna |
| 224397 | enst00000658705 | sg00000228549 | bx284668.2-206 | 1 | 16873114 | 16874092 | + | lnc_RNA | lncrna |
| 224991 | enst00000362684 | sg00000277234 | rnu1-5p-201 | 1 | 16873708 | 16873851 | + | snRNA | snrna |
| 240378 | enst00000453917 | sg00000235241 | bx284668.4-201 | 1 | 16889095 | 16889602 | + | pseudogenic_transcript | processed_pseudogene |
| 240656 | enst00000422124 | sg00000238142 | bx284668.5-201 | 1 | 16888538 | 16889373 | - | lnc_RNA | lncrna |
| 240784 | enst00000660464 | sg00000238142 | bx284668.5-206 | 1 | 16888542 | 16889501 | - | lnc_RNA | lncrna |
| 240801 | enst00000654227 | sg00000238142 | bx284668.5-207 | 1 | 16887577 | 16889518 | - | lnc_RNA | lncrna |
| 240872 | enst00000666544 | sg00000238142 | bx284668.5-205 | 1 | 16888542 | 16889589 | - | lnc_RNA | lncrna |
| 240925 | enst00000416869 | sg00000238142 | bx284668.5-202 | 1 | 16888542 | 16889642 | - | lnc_RNA | lncrna |
| 240932 | enst00000457075 | sg00000238142 | bx284668.5-203 | 1 | 16888542 | 16889649 | - | lnc_RNA | lncrna |
| 240989 | enst00000671472 | sg00000238142 | bx284668.5-204 | 1 | 16887761 | 16889706 | - | lnc_RNA | lncrna |
| -242948 | enst00000491418 | sg00000187144 | spata21-204 | 1 | 16387117 | 16403974 | - | mRNA | protein_coding |
| 247263 | enst00000384278 | sg00000207005 | rnu1-2-201 | 1 | 16895980 | 16896143 | + | snRNA | snrna |
| 256059 | enst00000606899 | sg00000272426 | bx284668.6-201 | 1 | 16904339 | 16904776 | - | lnc_RNA | lncrna |
| 273214 | enst00000375541 | sg00000058453 | crocc-201 | 1 | 16921931 | 16972964 | + | mRNA | protein_coding |
| 274038 | enst00000445545 | sg00000058453 | crocc-202 | 1 | 16922755 | 16961078 | + | mRNA | protein_coding |
| 274050 | enst00000467938 | sg00000058453 | crocc-207 | 1 | 16922767 | 16954362 | + | mRNA | protein_coding |
| -277392 | enst00000445689 | sg00000226457 | rpl22p3-201 | 1 | 16369150 | 16369530 | - | pseudogenic_transcript | processed_pseudogene |
| -279211 | enst00000472461 | sg00000055070 | szrd1-205 | 1 | 16367711 | 16395273 | + | lnc_RNA | processed_transcript |
| -279657 | enst00000492354 | sg00000055070 | szrd1-210 | 1 | 16367265 | 16398142 | + | mRNA | protein_coding |
| -279675 | enst00000472351 | sg00000055070 | szrd1-204 | 1 | 16367247 | 16395390 | + | lnc_RNA | processed_transcript |
| -279679 | enst00000475554 | sg00000055070 | szrd1-207 | 1 | 16367243 | 16395172 | + | lnc_RNA | processed_transcript |
| -279679 | enst00000476423 | sg00000055070 | szrd1-208 | 1 | 16367243 | 16393385 | + | mRNA | nonsense_mediated_decay |
| -279680 | enst00000401088 | sg00000055070 | szrd1-201 | 1 | 16367242 | 16398145 | + | mRNA | protein_coding |
| -279687 | enst00000486763 | sg00000055070 | szrd1-209 | 1 | 16367235 | 16395139 | + | lnc_RNA | processed_transcript |
| -279697 | enst00000401089 | sg00000055070 | szrd1-202 | 1 | 16367225 | 16398145 | + | mRNA | protein_coding |
| -279834 | enst00000471507 | sg00000055070 | szrd1-203 | 1 | 16367088 | 16395406 | + | mRNA | protein_coding |
| 281418 | enst00000492631 | sg00000058453 | crocc-210 | 1 | 16930135 | 16946405 | + | lnc_RNA | processed_transcript |
| 288074 | enst00000467715 | sg00000058453 | crocc-206 | 1 | 16936791 | 16940093 | + | mRNA | protein_coding |
| 290192 | enst00000494191 | sg00000058453 | crocc-211 | 1 | 16938909 | 16954357 | + | lnc_RNA | retained_intron |
| -294347 | enst00000475078 | sg00000055070 | szrd1-206 | 1 | 16352575 | 16393355 | + | lnc_RNA | processed_transcript |
| -294442 | enst00000375592 | sg00000037637 | fbxo42-201 | 1 | 16246840 | 16352480 | - | mRNA | protein_coding |
| 295408 | enst00000486318 | sg00000058453 | crocc-209 | 1 | 16944125 | 16951955 | + | lnc_RNA | processed_transcript |
| 298150 | enst00000498688 | sg00000058453 | crocc-213 | 1 | 16946867 | 16953215 | + | lnc_RNA | processed_transcript |
| 299674 | enst00000477773 | sg00000058453 | crocc-208 | 1 | 16948391 | 16951338 | + | lnc_RNA | processed_transcript |
| 304440 | enst00000497654 | sg00000058453 | crocc-212 | 1 | 16953157 | 16954781 | + | lnc_RNA | retained_intron |
| 317311 | enst00000465021 | sg00000058453 | crocc-203 | 1 | 16966028 | 16970742 | + | lnc_RNA | processed_transcript |
| 321068 | enst00000465291 | sg00000058453 | crocc-204 | 1 | 16969785 | 16970967 | + | lnc_RNA | processed_transcript |
| 327585 | enst00000654887 | sg00000286898 | al049569.2-201 | 1 | 16976302 | 16977792 | + | lnc_RNA | lncrna |
| 329559 | enst00000375534 | sg00000117122 | mfap2-201 | 1 | 16974502 | 16978276 | - | mRNA | protein_coding |
| 329597 | enst00000478684 | sg00000117122 | mfap2-204 | 1 | 16976171 | 16978314 | - | lnc_RNA | processed_transcript |
| 329597 | enst00000492598 | sg00000117122 | mfap2-206 | 1 | 16976249 | 16978314 | - | lnc_RNA | processed_transcript |
| 330209 | enst00000446261 | sg00000226526 | al049569.1-201 | 1 | 16978926 | 17005091 | + | lnc_RNA | lncrna |
| -331555 | enst00000478089 | sg00000037637 | fbxo42-204 | 1 | 16292314 | 16315367 | - | lnc_RNA | processed_transcript |
| 331903 | enst00000375535 | sg00000117122 | mfap2-202 | 1 | 16974502 | 16980620 | - | mRNA | protein_coding |
| 331904 | enst00000490075 | sg00000117122 | mfap2-205 | 1 | 16974502 | 16980621 | - | lnc_RNA | processed_transcript |
| 331915 | enst00000476788 | sg00000117122 | mfap2-203 | 1 | 16975662 | 16980632 | - | lnc_RNA | processed_transcript |
| 341286 | enst00000502418 | sg00000159363 | atp13a2-206 | 1 | 16985981 | 16990003 | - | mRNA | protein_coding |
| 343141 | enst00000466561 | sg00000159363 | atp13a2-205 | 1 | 16985959 | 16991858 | - | lnc_RNA | retained_intron |
| 347566 | enst00000503552 | sg00000159363 | atp13a2-208 | 1 | 16990175 | 16996283 | - | mRNA | protein_coding |
| 347977 | enst00000509392 | sg00000159363 | atp13a2-211 | 1 | 16996034 | 16996694 | - | lnc_RNA | retained_intron |
| 351574 | enst00000502860 | sg00000159363 | atp13a2-207 | 1 | 16995859 | 17000291 | - | lnc_RNA | retained_intron |
| 351595 | enst00000506174 | sg00000159363 | atp13a2-209 | 1 | 16996087 | 17000312 | - | mRNA | protein_coding |
| 352130 | enst00000463860 | sg00000159363 | atp13a2-204 | 1 | 16995487 | 17000847 | - | lnc_RNA | retained_intron |
| 356355 | enst00000511957 | sg00000159363 | atp13a2-214 | 1 | 17000269 | 17005072 | - | mRNA | protein_coding |
| 356678 | enst00000508222 | sg00000159363 | atp13a2-210 | 1 | 17000283 | 17005395 | - | mRNA | protein_coding |
| 356997 | enst00000510069 | sg00000159363 | atp13a2-213 | 1 | 17000011 | 17005714 | - | mRNA | protein_coding |
| 357048 | enst00000509619 | sg00000159363 | atp13a2-212 | 1 | 17002320 | 17005765 | - | mRNA | protein_coding |
| 363198 | enst00000341676 | sg00000159363 | atp13a2-202 | 1 | 16985958 | 17011915 | - | mRNA | protein_coding |
| 363211 | enst00000617114 | sg00000159363 | atp13a2-215 | 1 | 16995859 | 17011928 | - | mRNA | protein_coding |
| 363211 | enst00000452699 | sg00000159363 | atp13a2-203 | 1 | 16985958 | 17011928 | - | mRNA | protein_coding |
| 363211 | enst00000326735 | sg00000159363 | atp13a2-201 | 1 | 16985958 | 17011928 | - | mRNA | protein_coding |
| 374319 | enst00000485092 | sg00000117118 | sdhb-206 | 1 | 17018752 | 17023036 | - | lnc_RNA | retained_intron |
| 374443 | enst00000475049 | sg00000117118 | sdhb-204 | 1 | 17018752 | 17023160 | - | lnc_RNA | processed_transcript |
| -393329 | enst00000444116 | sg00000037637 | fbxo42-202 | 1 | 16251082 | 16253593 | - | mRNA | protein_coding |
| -393495 | enst00000456164 | sg00000037637 | fbxo42-203 | 1 | 16251082 | 16253427 | - | mRNA | protein_coding |
| 396160 | enst00000475506 | sg00000117118 | sdhb-205 | 1 | 17027656 | 17044877 | - | lnc_RNA | retained_intron |
| 396502 | enst00000491274 | sg00000117118 | sdhb-208 | 1 | 17023973 | 17045219 | - | mRNA | protein_coding |
| 403771 | enst00000463045 | sg00000117118 | sdhb-202 | 1 | 17027749 | 17052488 | - | mRNA | protein_coding |
| 405290 | enst00000485515 | sg00000117118 | sdhb-207 | 1 | 17022608 | 17054007 | - | lnc_RNA | processed_transcript |
| 405314 | enst00000466613 | sg00000117118 | sdhb-203 | 1 | 17032530 | 17054031 | - | lnc_RNA | retained_intron |
| 405315 | enst00000375499 | sg00000117118 | sdhb-201 | 1 | 17018722 | 17054032 | - | mRNA | protein_coding |
| -405524 | enst00000421314 | sg00000233929 | mt1xp1-201 | 1 | 16241213 | 16241398 | - | pseudogenic_transcript | processed_pseudogene |
| -409739 | enst00000375599 | sg00000132881 | cplane2-201 | 1 | 16231692 | 16237183 | - | mRNA | protein_coding |
| -410263 | enst00000434014 | sg00000132881 | cplane2-202 | 1 | 16232281 | 16236659 | - | mRNA | protein_coding |
| -415587 | enst00000671994 | sg00000288398 | al109627.1-201 | 1 | 16228674 | 16231335 | - | lnc_RNA | lncrna |
| -418895 | enst00000602586 | sg00000237276 | ano7l1-203 | 1 | 16216469 | 16228027 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| 426634 | enst00000479534 | sg00000117115 | padi2-204 | 1 | 17067600 | 17075351 | - | lnc_RNA | processed_transcript |
| -429594 | enst00000475369 | sg00000237276 | ano7l1-202 | 1 | 16216457 | 16217328 | - | lnc_RNA | processed_transcript |
| -429762 | enst00000442385 | sg00000237276 | ano7l1-201 | 1 | 16215909 | 16217160 | - | lnc_RNA | processed_transcript |
| -434270 | enst00000270747 | sg00000142632 | arhgef19-201 | 1 | 16197854 | 16212652 | - | mRNA | protein_coding |
| 434709 | enst00000466151 | sg00000117115 | padi2-203 | 1 | 17067786 | 17083426 | - | lnc_RNA | processed_transcript |
| -439911 | enst00000478117 | sg00000142632 | arhgef19-205 | 1 | 16197854 | 16207011 | - | lnc_RNA | processed_transcript |
| -439940 | enst00000471928 | sg00000142632 | arhgef19-204 | 1 | 16205627 | 16206982 | - | lnc_RNA | processed_transcript |
| -440379 | enst00000449495 | sg00000142632 | arhgef19-203 | 1 | 16204811 | 16206543 | - | mRNA | protein_coding |
| -440396 | enst00000478210 | sg00000142632 | arhgef19-206 | 1 | 16204900 | 16206526 | - | lnc_RNA | processed_transcript |
| -440396 | enst00000441785 | sg00000142632 | arhgef19-202 | 1 | 16205849 | 16206526 | - | mRNA | protein_coding |
| -449068 | enst00000457809 | sg00000234166 | arhgef19-as1-201 | 1 | 16197854 | 16198357 | + | lnc_RNA | lncrna |
| 470718 | enst00000375481 | sg00000117115 | padi2-201 | 1 | 17079031 | 17119435 | - | mRNA | protein_coding |
| 470734 | enst00000375486 | sg00000117115 | padi2-202 | 1 | 17066761 | 17119451 | - | mRNA | protein_coding |
| -487656 | enst00000426353 | sg00000224621 | al451042.1-201 | 1 | 16159266 | 16161883 | + | lnc_RNA | lncrna |
| -490853 | enst00000358432 | sg00000142627 | epha2-201 | 1 | 16124337 | 16156069 | - | mRNA | protein_coding |
| -490870 | enst00000461614 | sg00000142627 | epha2-202 | 1 | 16148378 | 16156052 | - | lnc_RNA | processed_transcript |
| -491711 | enst00000424774 | sg00000227959 | al451042.2-201 | 1 | 16155211 | 16157329 | + | lnc_RNA | lncrna |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc