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CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #134 | 11 | 979911 | 980652 | 741 | 3 | 36 | 2.91546e-16 | 2.16375e-14 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| 4732 | enst00000527917 | sg00000183020 | ap2a2-211 | 11 | 985384 | 986846 | + | lnc_RNA | retained_intron |
| 4886 | enst00000524952 | sg00000183020 | ap2a2-204 | 11 | 985538 | 988827 | + | lnc_RNA | retained_intron |
| 15412 | enst00000525891 | sg00000183020 | ap2a2-206 | 11 | 996064 | 1009216 | + | lnc_RNA | processed_transcript |
| 20674 | enst00000529438 | sg00000183020 | ap2a2-216 | 11 | 1001326 | 1009366 | + | lnc_RNA | processed_transcript |
| 23015 | enst00000526401 | sg00000183020 | ap2a2-208 | 11 | 1003667 | 1009774 | + | lnc_RNA | retained_intron |
| 23080 | enst00000526376 | sg00000183020 | ap2a2-207 | 11 | 1003732 | 1007040 | + | lnc_RNA | retained_intron |
| 25892 | enst00000529427 | sg00000183020 | ap2a2-215 | 11 | 1006544 | 1008282 | + | lnc_RNA | retained_intron |
| 26057 | enst00000531497 | sg00000183020 | ap2a2-220 | 11 | 1006709 | 1010926 | + | lnc_RNA | retained_intron |
| 28703 | enst00000528816 | sg00000183020 | ap2a2-214 | 11 | 1009355 | 1010237 | + | lnc_RNA | retained_intron |
| -31490 | enst00000410629 | sg00000222561 | rnu6-1025p-201 | 11 | 948421 | 948524 | + | snRNA | snrna |
| -33450 | enst00000524559 | sg00000183020 | ap2a2-203 | 11 | 946461 | 977120 | + | mRNA | protein_coding |
| 35501 | enst00000532016 | sg00000184956 | muc6-204 | 11 | 1013473 | 1016153 | - | mRNA | protein_coding |
| -36811 | enst00000530801 | sg00000183020 | ap2a2-219 | 11 | 943100 | 972191 | + | mRNA | protein_coding |
| -37632 | enst00000526753 | sg00000183020 | ap2a2-209 | 11 | 942279 | 972197 | + | mRNA | protein_coding |
| -39176 | enst00000527024 | sg00000183020 | ap2a2-210 | 11 | 940735 | 972216 | + | mRNA | protein_coding |
| 40082 | enst00000527242 | sg00000184956 | muc6-203 | 11 | 1019905 | 1020734 | - | mRNA | protein_coding |
| -46350 | enst00000534485 | sg00000183020 | ap2a2-223 | 11 | 933561 | 977207 | + | mRNA | protein_coding |
| -47218 | enst00000531548 | sg00000183020 | ap2a2-221 | 11 | 932693 | 977157 | + | mRNA | protein_coding |
| 52557 | enst00000525923 | sg00000184956 | muc6-202 | 11 | 1031619 | 1033209 | - | mRNA | protein_coding |
| -53966 | enst00000528195 | sg00000183020 | ap2a2-212 | 11 | 925945 | 1000483 | + | lnc_RNA | processed_transcript |
| -54011 | enst00000528815 | sg00000183020 | ap2a2-213 | 11 | 925900 | 1010919 | + | mRNA | nonsense_mediated_decay |
| -54030 | enst00000448903 | sg00000183020 | ap2a2-202 | 11 | 925881 | 1012239 | + | mRNA | protein_coding |
| -54031 | enst00000534328 | sg00000183020 | ap2a2-222 | 11 | 925880 | 1010919 | + | mRNA | protein_coding |
| -54039 | enst00000525796 | sg00000183020 | ap2a2-205 | 11 | 925872 | 985477 | + | mRNA | protein_coding |
| -54041 | enst00000529858 | sg00000183020 | ap2a2-218 | 11 | 925870 | 970233 | + | lnc_RNA | processed_transcript |
| -54102 | enst00000332231 | sg00000183020 | ap2a2-201 | 11 | 925809 | 1012245 | + | mRNA | protein_coding |
| -55017 | enst00000529818 | sg00000183020 | ap2a2-217 | 11 | 924894 | 977193 | + | lnc_RNA | processed_transcript |
| 56066 | enst00000421673 | sg00000184956 | muc6-201 | 11 | 1012823 | 1036718 | - | mRNA | protein_coding |
| -64853 | enst00000449825 | sg00000177830 | chid1-204 | 11 | 867860 | 915058 | - | mRNA | protein_coding |
| -64853 | enst00000533056 | sg00000177830 | chid1-221 | 11 | 902197 | 915058 | - | mRNA | protein_coding |
| -65091 | enst00000533059 | sg00000177830 | chid1-222 | 11 | 902235 | 914820 | - | mRNA | protein_coding |
| -65110 | enst00000525840 | sg00000177830 | chid1-209 | 11 | 904701 | 914801 | - | mRNA | protein_coding |
| -65137 | enst00000528154 | sg00000177830 | chid1-211 | 11 | 904737 | 914774 | - | mRNA | protein_coding |
| -69076 | enst00000429789 | sg00000177830 | chid1-202 | 11 | 869762 | 910835 | - | mRNA | protein_coding |
| -69080 | enst00000436108 | sg00000177830 | chid1-203 | 11 | 869767 | 910831 | - | mRNA | protein_coding |
| -69090 | enst00000530939 | sg00000177830 | chid1-217 | 11 | 902245 | 910821 | - | mRNA | protein_coding |
| -69095 | enst00000525225 | sg00000177830 | chid1-208 | 11 | 902971 | 910816 | - | mRNA | protein_coding |
| -69101 | enst00000323578 | sg00000177830 | chid1-201 | 11 | 867859 | 910810 | - | mRNA | protein_coding |
| -69101 | enst00000528581 | sg00000177830 | chid1-215 | 11 | 869763 | 910810 | - | mRNA | protein_coding |
| -69120 | enst00000528426 | sg00000177830 | chid1-212 | 11 | 899353 | 910791 | - | mRNA | nonsense_mediated_decay |
| 69228 | enst00000534584 | sg00000254872 | linc02688-201 | 11 | 1049880 | 1055749 | + | lnc_RNA | lncrna |
| -71247 | enst00000534254 | sg00000177830 | chid1-224 | 11 | 884068 | 908664 | - | mRNA | nonsense_mediated_decay |
| -71252 | enst00000531859 | sg00000177830 | chid1-219 | 11 | 883146 | 908659 | - | mRNA | protein_coding |
| 71959 | enst00000617529 | sg00000254872 | linc02688-202 | 11 | 1052611 | 1055749 | + | lnc_RNA | lncrna |
| -75047 | enst00000526714 | sg00000177830 | chid1-210 | 11 | 870419 | 904864 | - | lnc_RNA | processed_transcript |
| -75095 | enst00000454838 | sg00000177830 | chid1-205 | 11 | 867860 | 904816 | - | mRNA | protein_coding |
| -77589 | enst00000524832 | sg00000177830 | chid1-207 | 11 | 882328 | 902322 | - | lnc_RNA | processed_transcript |
| 94223 | enst00000361558 | sg00000198788 | muc2-201 | 11 | 1074875 | 1110511 | + | lnc_RNA | processed_transcript |
| -95748 | enst00000528521 | sg00000177830 | chid1-213 | 11 | 870122 | 884163 | - | mRNA | nonsense_mediated_decay |
| -95760 | enst00000531010 | sg00000177830 | chid1-218 | 11 | 882980 | 884151 | - | lnc_RNA | retained_intron |
| -96632 | enst00000528534 | sg00000177830 | chid1-214 | 11 | 874722 | 883279 | - | lnc_RNA | processed_transcript |
| -96662 | enst00000529539 | sg00000177830 | chid1-216 | 11 | 868395 | 883249 | - | mRNA | protein_coding |
| -96733 | enst00000534207 | sg00000177830 | chid1-223 | 11 | 868399 | 883178 | - | mRNA | nonsense_mediated_decay |
| -109160 | enst00000524538 | sg00000177830 | chid1-206 | 11 | 869780 | 870751 | - | lnc_RNA | retained_intron |
| -109425 | enst00000532909 | sg00000177830 | chid1-220 | 11 | 868395 | 870486 | - | mRNA | nonsense_mediated_decay |
| 113822 | enst00000613187 | sg00000198788 | muc2-202 | 11 | 1094474 | 1099340 | + | pseudogenic_transcript | pseudogene |
| -116639 | enst00000494815 | sg00000214063 | tspan4-212 | 11 | 863272 | 867111 | + | lnc_RNA | retained_intron |
| -117566 | enst00000529566 | sg00000214063 | tspan4-218 | 11 | 862345 | 865825 | + | lnc_RNA | retained_intron |
| -117614 | enst00000468468 | sg00000214063 | tspan4-211 | 11 | 862297 | 867109 | + | lnc_RNA | retained_intron |
| -120116 | enst00000506172 | sg00000250397 | ap006623.1-201 | 11 | 856880 | 859795 | - | lnc_RNA | lncrna |
| 121803 | enst00000616479 | sg00000198788 | muc2-203 | 11 | 1102455 | 1103456 | + | mRNA | protein_coding |
| -130095 | enst00000527644 | sg00000214063 | tspan4-217 | 11 | 849816 | 865740 | + | mRNA | protein_coding |
| -131101 | enst00000409531 | sg00000214063 | tspan4-208 | 11 | 848810 | 867111 | + | mRNA | protein_coding |
| -132714 | enst00000346501 | sg00000214063 | tspan4-201 | 11 | 847197 | 866776 | + | mRNA | protein_coding |
| -132714 | enst00000464987 | sg00000214063 | tspan4-210 | 11 | 847197 | 867109 | + | lnc_RNA | retained_intron |
| -132714 | enst00000532375 | sg00000214063 | tspan4-220 | 11 | 847197 | 865942 | + | mRNA | protein_coding |
| -132714 | enst00000524895 | sg00000214063 | tspan4-213 | 11 | 847197 | 864653 | + | lnc_RNA | retained_intron |
| -132714 | enst00000526055 | sg00000214063 | tspan4-216 | 11 | 847197 | 862834 | + | lnc_RNA | retained_intron |
| -135465 | enst00000397404 | sg00000214063 | tspan4-204 | 11 | 844446 | 867116 | + | mRNA | protein_coding |
| -135758 | enst00000525201 | sg00000214063 | tspan4-214 | 11 | 844153 | 866676 | + | mRNA | protein_coding |
| -135794 | enst00000409543 | sg00000214063 | tspan4-209 | 11 | 844117 | 866857 | + | mRNA | protein_coding |
| -135830 | enst00000397406 | sg00000214063 | tspan4-205 | 11 | 844081 | 867116 | + | mRNA | protein_coding |
| -136572 | enst00000525334 | sg00000214063 | tspan4-215 | 11 | 843339 | 865753 | + | mRNA | protein_coding |
| -136596 | enst00000530404 | sg00000214063 | tspan4-219 | 11 | 843315 | 862741 | + | mRNA | protein_coding |
| -136970 | enst00000397408 | sg00000214063 | tspan4-206 | 11 | 842941 | 867116 | + | mRNA | protein_coding |
| -137059 | enst00000397397 | sg00000214063 | tspan4-203 | 11 | 842852 | 867111 | + | mRNA | protein_coding |
| -137087 | enst00000397396 | sg00000214063 | tspan4-202 | 11 | 842824 | 867116 | + | mRNA | protein_coding |
| -137099 | enst00000397411 | sg00000214063 | tspan4-207 | 11 | 842812 | 866817 | + | mRNA | protein_coding |
| -137382 | enst00000322028 | sg00000177700 | polr2l-201 | 11 | 839721 | 842529 | - | mRNA | protein_coding |
| -137382 | enst00000534030 | sg00000177700 | polr2l-202 | 11 | 837356 | 842529 | - | mRNA | nonsense_mediated_decay |
| -141731 | enst00000525181 | sg00000177697 | cd151-205 | 11 | 838180 | 839831 | + | lnc_RNA | processed_transcript |
| -143108 | enst00000532075 | sg00000177697 | cd151-221 | 11 | 836803 | 838016 | + | lnc_RNA | retained_intron |
| -144360 | enst00000526439 | sg00000177697 | cd151-209 | 11 | 835551 | 836360 | + | mRNA | protein_coding |
| -144717 | enst00000530320 | sg00000177697 | cd151-217 | 11 | 835194 | 837513 | + | mRNA | protein_coding |
| -145039 | enst00000528867 | sg00000177697 | cd151-214 | 11 | 834872 | 836436 | + | mRNA | protein_coding |
| -145375 | enst00000528011 | sg00000177697 | cd151-213 | 11 | 834536 | 838798 | + | mRNA | protein_coding |
| -146902 | enst00000530726 | sg00000177697 | cd151-218 | 11 | 833009 | 838831 | + | mRNA | nonsense_mediated_decay |
| -146914 | enst00000526661 | sg00000177697 | cd151-210 | 11 | 832997 | 837023 | + | lnc_RNA | retained_intron |
| -146917 | enst00000527341 | sg00000177697 | cd151-212 | 11 | 832994 | 837544 | + | mRNA | protein_coding |
| -146919 | enst00000532045 | sg00000177697 | cd151-220 | 11 | 832992 | 838835 | + | lnc_RNA | retained_intron |
| -146925 | enst00000531999 | sg00000177697 | cd151-219 | 11 | 832986 | 836539 | + | lnc_RNA | retained_intron |
| -146925 | enst00000525868 | sg00000177697 | cd151-208 | 11 | 832986 | 836525 | + | lnc_RNA | retained_intron |
| -146925 | enst00000525333 | sg00000177697 | cd151-206 | 11 | 832986 | 836405 | + | mRNA | protein_coding |
| -146942 | enst00000526693 | sg00000177697 | cd151-211 | 11 | 832969 | 837531 | + | mRNA | protein_coding |
| -146950 | enst00000645878 | sg00000177697 | cd151-223 | 11 | 832961 | 838830 | + | lnc_RNA | retained_intron |
| -146950 | enst00000529810 | sg00000177697 | cd151-215 | 11 | 832961 | 837613 | + | mRNA | protein_coding |
| -146953 | enst00000525718 | sg00000177697 | cd151-207 | 11 | 832958 | 836412 | + | mRNA | protein_coding |
| -146959 | enst00000530155 | sg00000177697 | cd151-216 | 11 | 832952 | 836480 | + | lnc_RNA | retained_intron |
| -146959 | enst00000397421 | sg00000177697 | cd151-203 | 11 | 832952 | 838834 | + | mRNA | protein_coding |
| -146959 | enst00000397420 | sg00000177697 | cd151-202 | 11 | 832952 | 838831 | + | mRNA | protein_coding |
| -146959 | enst00000322008 | sg00000177697 | cd151-201 | 11 | 832952 | 838835 | + | mRNA | protein_coding |
| -146979 | enst00000642413 | sg00000177697 | cd151-222 | 11 | 832932 | 837238 | + | lnc_RNA | processed_transcript |
| -147024 | enst00000524748 | sg00000177697 | cd151-204 | 11 | 832887 | 838017 | + | mRNA | protein_coding |
| -147028 | enst00000532946 | sg00000255108 | ap006621.1-201 | 11 | 823634 | 832883 | - | lnc_RNA | lncrna |
| -149426 | enst00000526531 | sg00000177685 | cracr2b-203 | 11 | 830485 | 831780 | + | lnc_RNA | retained_intron |
| -150604 | enst00000528694 | sg00000177685 | cracr2b-208 | 11 | 829307 | 831985 | + | lnc_RNA | retained_intron |
| -150606 | enst00000527763 | sg00000177685 | cracr2b-205 | 11 | 829305 | 831985 | + | lnc_RNA | retained_intron |
| -150614 | enst00000530688 | sg00000177685 | cracr2b-210 | 11 | 829297 | 831985 | + | lnc_RNA | retained_intron |
| -151444 | enst00000530737 | sg00000177685 | cracr2b-211 | 11 | 828467 | 829555 | + | lnc_RNA | retained_intron |
| -151651 | enst00000450448 | sg00000177685 | cracr2b-201 | 11 | 828260 | 831991 | + | mRNA | protein_coding |
| -151992 | enst00000525077 | sg00000177685 | cracr2b-202 | 11 | 827919 | 831986 | + | mRNA | protein_coding |
| -152333 | enst00000528542 | sg00000177685 | cracr2b-207 | 11 | 827578 | 831986 | + | mRNA | protein_coding |
| -152615 | enst00000530183 | sg00000177685 | cracr2b-209 | 11 | 827296 | 828766 | + | mRNA | protein_coding |
| -152631 | enst00000534606 | sg00000177685 | cracr2b-214 | 11 | 827280 | 829070 | + | lnc_RNA | retained_intron |
| -152663 | enst00000527089 | sg00000177685 | cracr2b-204 | 11 | 827248 | 828950 | + | mRNA | protein_coding |
| -153754 | enst00000534191 | sg00000177685 | cracr2b-213 | 11 | 826157 | 829352 | + | lnc_RNA | retained_intron |
| -153765 | enst00000533803 | sg00000177685 | cracr2b-212 | 11 | 826146 | 828929 | + | mRNA | protein_coding |
| -153767 | enst00000528315 | sg00000177685 | cracr2b-206 | 11 | 826144 | 828711 | + | mRNA | protein_coding |
| -155266 | enst00000528982 | sg00000255108 | ap006621.1-202 | 11 | 823656 | 824645 | - | lnc_RNA | lncrna |
| -156263 | enst00000526083 | sg00000177666 | pnpla2-203 | 11 | 823648 | 824437 | + | lnc_RNA | retained_intron |
| -156368 | enst00000529255 | sg00000177666 | pnpla2-204 | 11 | 823543 | 825218 | + | lnc_RNA | retained_intron |
| -157895 | enst00000531923 | sg00000177666 | pnpla2-205 | 11 | 822016 | 823572 | + | lnc_RNA | retained_intron |
| -158137 | enst00000534561 | sg00000177666 | pnpla2-206 | 11 | 821774 | 822258 | + | lnc_RNA | retained_intron |
| -159076 | enst00000525250 | sg00000177666 | pnpla2-202 | 11 | 820835 | 825219 | + | lnc_RNA | retained_intron |
| -160997 | enst00000336615 | sg00000177666 | pnpla2-201 | 11 | 818914 | 825573 | + | mRNA | protein_coding |
| -167832 | enst00000527517 | sg00000177600 | rplp2-205 | 11 | 812079 | 812850 | + | lnc_RNA | retained_intron |
| -168230 | enst00000362915 | sg00000199785 | snora52-201 | 11 | 811681 | 811814 | + | snoRNA | snorna |
| -168539 | enst00000525722 | sg00000177600 | rplp2-203 | 11 | 811372 | 812875 | + | lnc_RNA | retained_intron |
| -169513 | enst00000526222 | sg00000177600 | rplp2-204 | 11 | 810398 | 812861 | + | lnc_RNA | processed_transcript |
| -169642 | enst00000530398 | sg00000177600 | rplp2-206 | 11 | 810269 | 812871 | + | mRNA | protein_coding |
| -169908 | enst00000524867 | sg00000177600 | rplp2-202 | 11 | 810003 | 811839 | + | lnc_RNA | retained_intron |
| -169927 | enst00000530797 | sg00000177600 | rplp2-207 | 11 | 809984 | 812874 | + | mRNA | protein_coding |
| -169944 | enst00000321153 | sg00000177600 | rplp2-201 | 11 | 809967 | 812876 | + | mRNA | protein_coding |
| -169946 | enst00000532004 | sg00000177600 | rplp2-208 | 11 | 809965 | 812880 | + | lnc_RNA | processed_transcript |
| -170158 | enst00000530911 | sg00000177595 | pidd1-208 | 11 | 805777 | 809753 | - | lnc_RNA | processed_transcript |
| -170388 | enst00000534649 | sg00000177595 | pidd1-211 | 11 | 803376 | 809523 | - | lnc_RNA | processed_transcript |
| -170412 | enst00000534525 | sg00000177595 | pidd1-210 | 11 | 799185 | 809499 | - | lnc_RNA | retained_intron |
| -174680 | enst00000347755 | sg00000177595 | pidd1-201 | 11 | 799184 | 805231 | - | mRNA | protein_coding |
| -174681 | enst00000527357 | sg00000177595 | pidd1-205 | 11 | 799185 | 805230 | - | lnc_RNA | retained_intron |
| -174808 | enst00000524486 | sg00000177595 | pidd1-203 | 11 | 799180 | 805103 | - | mRNA | nonsense_mediated_decay |
| -175236 | enst00000525028 | sg00000177595 | pidd1-204 | 11 | 799179 | 804675 | - | mRNA | nonsense_mediated_decay |
| -175442 | enst00000411829 | sg00000177595 | pidd1-202 | 11 | 799184 | 804469 | - | mRNA | protein_coding |
| -176762 | enst00000528122 | sg00000177595 | pidd1-207 | 11 | 802323 | 803149 | - | lnc_RNA | processed_transcript |
| -177161 | enst00000531286 | sg00000177595 | pidd1-209 | 11 | 799185 | 802750 | - | mRNA | nonsense_mediated_decay |
| 177301 | enst00000621226 | sg00000215182 | muc5ac-201 | 11 | 1157953 | 1201138 | + | mRNA | protein_coding |
| -177825 | enst00000527812 | sg00000177595 | pidd1-206 | 11 | 799326 | 802086 | - | lnc_RNA | processed_transcript |
| -181630 | enst00000628067 | sg00000177542 | slc25a22-228 | 11 | 790475 | 798281 | - | mRNA | protein_coding |
| -181640 | enst00000531437 | sg00000177542 | slc25a22-217 | 11 | 792445 | 798271 | - | mRNA | protein_coding |
| -181641 | enst00000531514 | sg00000177542 | slc25a22-218 | 11 | 792721 | 798270 | - | mRNA | nonsense_mediated_decay |
| -181642 | enst00000524891 | sg00000177542 | slc25a22-204 | 11 | 793478 | 798269 | - | lnc_RNA | retained_intron |
| -181644 | enst00000530360 | sg00000177542 | slc25a22-215 | 11 | 794463 | 798267 | - | mRNA | protein_coding |
| -181913 | enst00000529351 | sg00000177542 | slc25a22-214 | 11 | 792616 | 797998 | - | mRNA | nonsense_mediated_decay |
| -181914 | enst00000532484 | sg00000177542 | slc25a22-222 | 11 | 792570 | 797997 | - | mRNA | protein_coding |
| -181916 | enst00000531214 | sg00000177542 | slc25a22-216 | 11 | 791644 | 797995 | - | mRNA | protein_coding |
| -182400 | enst00000620120 | sg00000274897 | pano1-201 | 11 | 797511 | 799185 | + | mRNA | protein_coding |
| -183648 | enst00000320230 | sg00000177542 | slc25a22-201 | 11 | 790475 | 796263 | - | mRNA | protein_coding |
| -183656 | enst00000532361 | sg00000177542 | slc25a22-220 | 11 | 793905 | 796255 | - | lnc_RNA | retained_intron |
| -183661 | enst00000528606 | sg00000177542 | slc25a22-211 | 11 | 792609 | 796250 | - | mRNA | protein_coding |
| -183671 | enst00000625752 | sg00000177542 | slc25a22-226 | 11 | 792929 | 796240 | - | mRNA | protein_coding |
| -183674 | enst00000629634 | sg00000177542 | slc25a22-230 | 11 | 793530 | 796237 | - | mRNA | protein_coding |
| -183674 | enst00000625316 | sg00000177542 | slc25a22-224 | 11 | 793577 | 796237 | - | lnc_RNA | processed_transcript |
| -183696 | enst00000629602 | sg00000177542 | slc25a22-229 | 11 | 794454 | 796215 | - | lnc_RNA | processed_transcript |
| -183708 | enst00000528936 | sg00000177542 | slc25a22-212 | 11 | 792972 | 796203 | - | mRNA | protein_coding |
| -183711 | enst00000532459 | sg00000177542 | slc25a22-221 | 11 | 794403 | 796200 | - | lnc_RNA | retained_intron |
| -183726 | enst00000533385 | sg00000177542 | slc25a22-223 | 11 | 792656 | 796185 | - | mRNA | protein_coding |
| -184206 | enst00000531534 | sg00000177542 | slc25a22-219 | 11 | 792672 | 795705 | - | mRNA | protein_coding |
| -184234 | enst00000529066 | sg00000177542 | slc25a22-213 | 11 | 793587 | 795677 | - | mRNA | protein_coding |
| -184441 | enst00000625419 | sg00000177542 | slc25a22-225 | 11 | 792455 | 795470 | - | mRNA | protein_coding |
| -184473 | enst00000456706 | sg00000177542 | slc25a22-202 | 11 | 792938 | 795438 | - | mRNA | protein_coding |
| -184492 | enst00000525010 | sg00000177542 | slc25a22-205 | 11 | 794369 | 795419 | - | lnc_RNA | retained_intron |
| -184492 | enst00000525644 | sg00000177542 | slc25a22-206 | 11 | 794406 | 795419 | - | lnc_RNA | retained_intron |
| -184517 | enst00000527734 | sg00000177542 | slc25a22-210 | 11 | 792922 | 795394 | - | mRNA | nonsense_mediated_decay |
| -184547 | enst00000526152 | sg00000177542 | slc25a22-207 | 11 | 792900 | 795364 | - | mRNA | protein_coding |
| -184548 | enst00000527723 | sg00000177542 | slc25a22-209 | 11 | 792879 | 795363 | - | mRNA | protein_coding |
| -184625 | enst00000627843 | sg00000177542 | slc25a22-227 | 11 | 792305 | 795286 | - | mRNA | protein_coding |
| -184718 | enst00000527127 | sg00000177542 | slc25a22-208 | 11 | 794261 | 795193 | - | lnc_RNA | retained_intron |
| -184736 | enst00000481290 | sg00000177542 | slc25a22-203 | 11 | 792023 | 795175 | - | mRNA | protein_coding |
| -186222 | enst00000630809 | sg00000177542 | slc25a22-231 | 11 | 792362 | 793689 | - | lnc_RNA | retained_intron |
| -189798 | enst00000524587 | sg00000184524 | cend1-202 | 11 | 788178 | 790113 | - | lnc_RNA | processed_transcript |
| -189821 | enst00000330106 | sg00000184524 | cend1-201 | 11 | 787115 | 790090 | - | mRNA | protein_coding |
| -198266 | enst00000533938 | sg00000255142 | ap006621.2-201 | 11 | 781645 | 782105 | + | lnc_RNA | lncrna |
| -199794 | enst00000623692 | sg00000279672 | ap006621.5-202 | 11 | 780117 | 780755 | + | pseudogenic_transcript | pseudogene |
| -200294 | enst00000623846 | sg00000279672 | ap006621.5-201 | 11 | 779617 | 780755 | + | unconfirmed_transcript | tec |
| -202303 | enst00000525941 | sg00000255284 | ap006621.3-204 | 11 | 777608 | 784297 | + | lnc_RNA | lncrna |
| -202329 | enst00000655766 | sg00000255284 | ap006621.3-202 | 11 | 777582 | 778715 | + | lnc_RNA | lncrna |
| -202329 | enst00000530083 | sg00000255284 | ap006621.3-203 | 11 | 777582 | 784180 | + | lnc_RNA | lncrna |
| -202333 | enst00000526588 | sg00000255284 | ap006621.3-201 | 11 | 777578 | 778285 | + | lnc_RNA | lncrna |
| -202423 | enst00000354286 | sg00000177225 | gatd1-202 | 11 | 767225 | 777488 | - | mRNA | nonsense_mediated_decay |
| -202424 | enst00000526325 | sg00000177225 | gatd1-206 | 11 | 767228 | 777487 | - | mRNA | protein_coding |
| -202424 | enst00000319863 | sg00000177225 | gatd1-201 | 11 | 767222 | 777487 | - | mRNA | protein_coding |
| -202426 | enst00000532320 | sg00000177225 | gatd1-213 | 11 | 770550 | 777485 | - | lnc_RNA | retained_intron |
| -202427 | enst00000532839 | sg00000177225 | gatd1-214 | 11 | 771035 | 777484 | - | lnc_RNA | processed_transcript |
| -202427 | enst00000528602 | sg00000177225 | gatd1-209 | 11 | 773330 | 777484 | - | lnc_RNA | retained_intron |
| -202428 | enst00000529966 | sg00000177225 | gatd1-211 | 11 | 770812 | 777483 | - | lnc_RNA | processed_transcript |
| -202428 | enst00000534603 | sg00000177225 | gatd1-216 | 11 | 770812 | 777483 | - | mRNA | nonsense_mediated_decay |
| -202436 | enst00000524550 | sg00000177225 | gatd1-205 | 11 | 770470 | 777475 | - | mRNA | protein_coding |
| -202440 | enst00000397472 | sg00000177225 | gatd1-203 | 11 | 767222 | 777471 | - | mRNA | protein_coding |
| -202732 | enst00000529362 | sg00000177225 | gatd1-210 | 11 | 775065 | 777179 | - | lnc_RNA | processed_transcript |
| -205843 | enst00000528309 | sg00000177225 | gatd1-208 | 11 | 767222 | 774068 | - | mRNA | protein_coding |
| -205885 | enst00000526650 | sg00000177225 | gatd1-207 | 11 | 767228 | 774026 | - | mRNA | protein_coding |
| -207297 | enst00000530209 | sg00000177225 | gatd1-212 | 11 | 770698 | 772614 | - | lnc_RNA | retained_intron |
| -208484 | enst00000465313 | sg00000177225 | gatd1-204 | 11 | 767220 | 771427 | - | mRNA | protein_coding |
| -208541 | enst00000533960 | sg00000177225 | gatd1-215 | 11 | 770844 | 771370 | - | lnc_RNA | retained_intron |
| -215541 | enst00000532202 | sg00000177156 | taldo1-207 | 11 | 764370 | 765005 | + | lnc_RNA | processed_transcript |
| -215929 | enst00000530666 | sg00000177156 | taldo1-206 | 11 | 763982 | 764947 | + | lnc_RNA | retained_intron |
| -224167 | enst00000533796 | sg00000177156 | taldo1-209 | 11 | 755744 | 760257 | + | lnc_RNA | retained_intron |
| -232447 | enst00000319006 | sg00000177156 | taldo1-201 | 11 | 747464 | 765012 | + | mRNA | protein_coding |
| -232447 | enst00000530119 | sg00000177156 | taldo1-204 | 11 | 747464 | 760965 | + | lnc_RNA | retained_intron |
| -232457 | enst00000530440 | sg00000177156 | taldo1-205 | 11 | 747454 | 763850 | + | mRNA | nonsense_mediated_decay |
| -232483 | enst00000528097 | sg00000177156 | taldo1-203 | 11 | 747428 | 765012 | + | mRNA | protein_coding |
| -232494 | enst00000532685 | sg00000177156 | taldo1-208 | 11 | 747417 | 756284 | + | lnc_RNA | retained_intron |
| -232496 | enst00000528070 | sg00000177156 | taldo1-202 | 11 | 747415 | 763520 | + | mRNA | nonsense_mediated_decay |
| 237878 | enst00000654177 | sg00000286275 | ac061979.1-201 | 11 | 1218530 | 1220242 | + | lnc_RNA | lncrna |
| 242414 | enst00000525715 | sg00000117983 | muc5b-201 | 11 | 1223066 | 1239541 | + | lnc_RNA | retained_intron |
| 242414 | enst00000529681 | sg00000117983 | muc5b-204 | 11 | 1223066 | 1262172 | + | mRNA | protein_coding |
| 247868 | enst00000531082 | sg00000117983 | muc5b-205 | 11 | 1228520 | 1229763 | + | lnc_RNA | retained_intron |
| -252864 | enst00000527021 | sg00000269915 | ap006621.4-201 | 11 | 708564 | 727047 | - | lnc_RNA | lncrna |
| -252957 | enst00000524973 | sg00000177106 | eps8l2-204 | 11 | 726954 | 727658 | + | lnc_RNA | processed_transcript |
| -253284 | enst00000534449 | sg00000177106 | eps8l2-227 | 11 | 726627 | 727722 | + | lnc_RNA | processed_transcript |
| -253350 | enst00000534027 | sg00000177106 | eps8l2-226 | 11 | 726561 | 727051 | + | lnc_RNA | retained_intron |
| -253830 | enst00000534679 | sg00000177106 | eps8l2-228 | 11 | 726081 | 727113 | + | lnc_RNA | retained_intron |
| -255349 | enst00000527832 | sg00000177106 | eps8l2-211 | 11 | 724562 | 727722 | + | lnc_RNA | retained_intron |
| -257985 | enst00000531393 | sg00000177106 | eps8l2-220 | 11 | 721926 | 727721 | + | lnc_RNA | retained_intron |
| -257985 | enst00000610855 | sg00000177106 | eps8l2-230 | 11 | 721926 | 727048 | + | mRNA | protein_coding |
| -258629 | enst00000533816 | sg00000177106 | eps8l2-225 | 11 | 721282 | 722343 | + | lnc_RNA | retained_intron |
| -258826 | enst00000530452 | sg00000177106 | eps8l2-217 | 11 | 721085 | 723345 | + | mRNA | nonsense_mediated_decay |
| -258836 | enst00000528770 | sg00000177106 | eps8l2-212 | 11 | 721075 | 727723 | + | mRNA | nonsense_mediated_decay |
| -258838 | enst00000532545 | sg00000177106 | eps8l2-222 | 11 | 721073 | 721800 | + | lnc_RNA | retained_intron |
| -258892 | enst00000526651 | sg00000177106 | eps8l2-207 | 11 | 721019 | 722500 | + | lnc_RNA | retained_intron |
| -258939 | enst00000531471 | sg00000177106 | eps8l2-221 | 11 | 720972 | 721631 | + | lnc_RNA | retained_intron |
| -259305 | enst00000524474 | sg00000177106 | eps8l2-202 | 11 | 720606 | 722584 | + | lnc_RNA | retained_intron |
| 269024 | enst00000532061 | sg00000255177 | muc5b-as1-201 | 11 | 1242261 | 1249676 | - | lnc_RNA | lncrna |
| -270351 | enst00000530118 | sg00000177106 | eps8l2-216 | 11 | 709560 | 720899 | + | lnc_RNA | retained_intron |
| -270543 | enst00000526198 | sg00000177106 | eps8l2-205 | 11 | 709368 | 727034 | + | mRNA | protein_coding |
| -273196 | enst00000525626 | sg00000177030 | deaf1-203 | 11 | 686932 | 706715 | - | lnc_RNA | processed_transcript |
| -273282 | enst00000530636 | sg00000177106 | eps8l2-218 | 11 | 706629 | 727051 | + | mRNA | protein_coding |
| -273287 | enst00000526857 | sg00000177030 | deaf1-206 | 11 | 697486 | 706624 | - | lnc_RNA | processed_transcript |
| -273295 | enst00000526380 | sg00000177106 | eps8l2-206 | 11 | 706616 | 709789 | + | lnc_RNA | retained_intron |
| -273316 | enst00000531348 | sg00000177106 | eps8l2-219 | 11 | 706595 | 720181 | + | mRNA | protein_coding |
| -273669 | enst00000527807 | sg00000177106 | eps8l2-210 | 11 | 706242 | 720191 | + | lnc_RNA | retained_intron |
| -273674 | enst00000533500 | sg00000177106 | eps8l2-224 | 11 | 706237 | 720147 | + | mRNA | protein_coding |
| -273680 | enst00000529680 | sg00000177106 | eps8l2-214 | 11 | 706231 | 709795 | + | lnc_RNA | retained_intron |
| -273680 | enst00000530093 | sg00000177106 | eps8l2-215 | 11 | 706231 | 710482 | + | lnc_RNA | retained_intron |
| -273680 | enst00000318562 | sg00000177106 | eps8l2-201 | 11 | 706231 | 727727 | + | mRNA | protein_coding |
| -273687 | enst00000526909 | sg00000177106 | eps8l2-208 | 11 | 706224 | 727721 | + | mRNA | nonsense_mediated_decay |
| -273695 | enst00000650127 | sg00000177106 | eps8l2-232 | 11 | 706216 | 727692 | + | mRNA | protein_coding |
| -273708 | enst00000529346 | sg00000177106 | eps8l2-213 | 11 | 706203 | 722302 | + | lnc_RNA | retained_intron |
| -273710 | enst00000534755 | sg00000177106 | eps8l2-229 | 11 | 706201 | 720135 | + | mRNA | protein_coding |
| -273791 | enst00000614442 | sg00000177106 | eps8l2-231 | 11 | 706120 | 727726 | + | mRNA | protein_coding |
| -273794 | enst00000533256 | sg00000177106 | eps8l2-223 | 11 | 706117 | 727724 | + | mRNA | protein_coding |
| -274694 | enst00000527199 | sg00000177106 | eps8l2-209 | 11 | 705217 | 709584 | + | mRNA | protein_coding |
| 275953 | enst00000619480 | sg00000275669 | mir6744-201 | 11 | 1256605 | 1256670 | + | miRNA | mirna |
| -276904 | enst00000528024 | sg00000177042 | tmem80-206 | 11 | 703007 | 704129 | + | lnc_RNA | processed_transcript |
| 276974 | enst00000526859 | sg00000117983 | muc5b-202 | 11 | 1257626 | 1262043 | + | mRNA | protein_coding |
| 278871 | enst00000527802 | sg00000117983 | muc5b-203 | 11 | 1259523 | 1260085 | + | lnc_RNA | processed_transcript |
| -284106 | enst00000488769 | sg00000177042 | tmem80-203 | 11 | 695805 | 701127 | + | mRNA | protein_coding |
| -284109 | enst00000492023 | sg00000177042 | tmem80-204 | 11 | 695802 | 704121 | + | lnc_RNA | retained_intron |
| -284115 | enst00000526170 | sg00000177042 | tmem80-205 | 11 | 695796 | 705028 | + | mRNA | protein_coding |
| -284268 | enst00000397512 | sg00000177042 | tmem80-202 | 11 | 695643 | 704129 | + | mRNA | protein_coding |
| -284320 | enst00000608174 | sg00000177042 | tmem80-207 | 11 | 695591 | 704127 | + | mRNA | protein_coding |
| -284379 | enst00000382409 | sg00000177030 | deaf1-201 | 11 | 644233 | 695532 | - | mRNA | protein_coding |
| -284483 | enst00000397510 | sg00000177042 | tmem80-201 | 11 | 695428 | 703412 | + | mRNA | protein_coding |
| -284980 | enst00000529717 | sg00000177030 | deaf1-210 | 11 | 686921 | 694931 | - | mRNA | nonsense_mediated_decay |
| -285473 | enst00000524763 | sg00000177106 | eps8l2-203 | 11 | 694438 | 720212 | + | mRNA | protein_coding |
| -286267 | enst00000528864 | sg00000177030 | deaf1-209 | 11 | 686972 | 693644 | - | lnc_RNA | processed_transcript |
| -287561 | enst00000524786 | sg00000177030 | deaf1-202 | 11 | 687912 | 692350 | - | lnc_RNA | processed_transcript |
| -288314 | enst00000529727 | sg00000177030 | deaf1-211 | 11 | 689663 | 691597 | - | lnc_RNA | processed_transcript |
| -291975 | enst00000527170 | sg00000177030 | deaf1-207 | 11 | 644233 | 687936 | - | mRNA | nonsense_mediated_decay |
| -294940 | enst00000530813 | sg00000177030 | deaf1-212 | 11 | 653962 | 684971 | - | lnc_RNA | processed_transcript |
| -298866 | enst00000525904 | sg00000177030 | deaf1-204 | 11 | 653941 | 681045 | - | lnc_RNA | processed_transcript |
| -301132 | enst00000526790 | sg00000177030 | deaf1-205 | 11 | 674372 | 678779 | - | lnc_RNA | retained_intron |
| 311518 | enst00000528719 | sg00000078902 | tollip-209 | 11 | 1288636 | 1292170 | - | lnc_RNA | processed_transcript |
| -314001 | enst00000527799 | sg00000255158 | ac131934.1-201 | 11 | 665910 | 678391 | + | lnc_RNA | lncrna |
| 322138 | enst00000527886 | sg00000078902 | tollip-207 | 11 | 1274372 | 1302790 | - | mRNA | protein_coding |
| 325542 | enst00000530821 | sg00000078902 | tollip-212 | 11 | 1295739 | 1306194 | - | lnc_RNA | processed_transcript |
| 328931 | enst00000530506 | sg00000078902 | tollip-210 | 11 | 1276817 | 1309583 | - | mRNA | nonsense_mediated_decay |
| 328938 | enst00000527746 | sg00000078902 | tollip-206 | 11 | 1290095 | 1309590 | - | lnc_RNA | retained_intron |
| 328945 | enst00000527638 | sg00000078902 | tollip-205 | 11 | 1290915 | 1309597 | - | lnc_RNA | processed_transcript |
| 328967 | enst00000525159 | sg00000078902 | tollip-203 | 11 | 1274373 | 1309619 | - | mRNA | protein_coding |
| 328971 | enst00000527938 | sg00000078902 | tollip-208 | 11 | 1277013 | 1309623 | - | mRNA | protein_coding |
| 328971 | enst00000530541 | sg00000078902 | tollip-211 | 11 | 1277155 | 1309623 | - | mRNA | protein_coding |
| 328971 | enst00000532551 | sg00000078902 | tollip-213 | 11 | 1295377 | 1309623 | - | lnc_RNA | retained_intron |
| 328980 | enst00000317204 | sg00000078902 | tollip-202 | 11 | 1274371 | 1309632 | - | mRNA | protein_coding |
| 328992 | enst00000527085 | sg00000078902 | tollip-204 | 11 | 1298149 | 1309644 | - | lnc_RNA | processed_transcript |
| 329002 | enst00000263646 | sg00000078902 | tollip-201 | 11 | 1275653 | 1309654 | - | mRNA | protein_coding |
| 329117 | enst00000530897 | sg00000255153 | tollip-as1-201 | 11 | 1309769 | 1310707 | + | lnc_RNA | lncrna |
| -333315 | enst00000527658 | sg00000177030 | deaf1-208 | 11 | 644234 | 646596 | - | lnc_RNA | processed_transcript |
| -340854 | enst00000528733 | sg00000069696 | drd4-202 | 11 | 639057 | 639793 | + | lnc_RNA | processed_transcript |
| -342642 | enst00000176183 | sg00000069696 | drd4-201 | 11 | 637269 | 640706 | + | mRNA | protein_coding |
| -352730 | enst00000176195 | sg00000070031 | sct-201 | 11 | 626309 | 627181 | - | mRNA | protein_coding |
| -353833 | enst00000674088 | sg00000099834 | cdhr5-211 | 11 | 617259 | 626078 | - | mRNA | protein_coding |
| -354742 | enst00000349570 | sg00000099834 | cdhr5-201 | 11 | 617256 | 625169 | - | mRNA | protein_coding |
| -354742 | enst00000529337 | sg00000099834 | cdhr5-205 | 11 | 624213 | 625169 | - | lnc_RNA | processed_transcript |
| -354956 | enst00000534311 | sg00000099834 | cdhr5-210 | 11 | 621397 | 624955 | - | mRNA | protein_coding |
| -354956 | enst00000397542 | sg00000099834 | cdhr5-203 | 11 | 616583 | 624955 | - | mRNA | protein_coding |
| -354956 | enst00000526077 | sg00000099834 | cdhr5-204 | 11 | 621217 | 624955 | - | mRNA | protein_coding |
| -354956 | enst00000531088 | sg00000099834 | cdhr5-206 | 11 | 621420 | 624955 | - | mRNA | protein_coding |
| -354956 | enst00000531899 | sg00000099834 | cdhr5-208 | 11 | 619416 | 624955 | - | lnc_RNA | retained_intron |
| -354979 | enst00000531177 | sg00000099834 | cdhr5-207 | 11 | 617256 | 624932 | - | mRNA | nonsense_mediated_decay |
| -354987 | enst00000358353 | sg00000099834 | cdhr5-202 | 11 | 616577 | 624924 | - | mRNA | protein_coding |
| 356416 | enst00000662307 | sg00000287935 | ac136297.1-201 | 11 | 1333250 | 1337068 | - | lnc_RNA | lncrna |
| -358774 | enst00000532949 | sg00000099834 | cdhr5-209 | 11 | 619688 | 621137 | - | lnc_RNA | processed_transcript |
| -363928 | enst00000532326 | sg00000185507 | irf7-212 | 11 | 612591 | 615983 | - | mRNA | nonsense_mediated_decay |
| -363932 | enst00000532788 | sg00000185507 | irf7-213 | 11 | 613822 | 615979 | - | mRNA | nonsense_mediated_decay |
| -363941 | enst00000330243 | sg00000185507 | irf7-201 | 11 | 612591 | 615970 | - | mRNA | protein_coding |
| -363961 | enst00000525445 | sg00000185507 | irf7-206 | 11 | 612555 | 615950 | - | mRNA | protein_coding |
| -363961 | enst00000533182 | sg00000185507 | irf7-214 | 11 | 612561 | 615950 | - | mRNA | nonsense_mediated_decay |
| -363973 | enst00000533190 | sg00000185507 | irf7-215 | 11 | 614783 | 615938 | - | mRNA | nonsense_mediated_decay |
| -363990 | enst00000348655 | sg00000185507 | irf7-202 | 11 | 612555 | 615921 | - | mRNA | protein_coding |
| -364183 | enst00000397566 | sg00000185507 | irf7-203 | 11 | 612555 | 615728 | - | mRNA | protein_coding |
| -364183 | enst00000397570 | sg00000185507 | irf7-204 | 11 | 612576 | 615728 | - | mRNA | protein_coding |
| -364187 | enst00000647801 | sg00000185507 | irf7-216 | 11 | 614483 | 615724 | - | mRNA | protein_coding |
| -364261 | enst00000532096 | sg00000185507 | irf7-211 | 11 | 614090 | 615650 | - | lnc_RNA | retained_intron |
| -364264 | enst00000649187 | sg00000185507 | irf7-217 | 11 | 614388 | 615647 | - | mRNA | protein_coding |
| -364299 | enst00000469048 | sg00000185507 | irf7-205 | 11 | 612583 | 615612 | - | mRNA | nonsense_mediated_decay |
| -364659 | enst00000528413 | sg00000185507 | irf7-209 | 11 | 612553 | 615252 | - | mRNA | nonsense_mediated_decay |
| -365024 | enst00000527160 | sg00000185507 | irf7-208 | 11 | 614009 | 614887 | - | lnc_RNA | retained_intron |
| -365514 | enst00000525750 | sg00000185507 | irf7-207 | 11 | 613553 | 614397 | - | lnc_RNA | retained_intron |
| -366320 | enst00000531912 | sg00000185507 | irf7-210 | 11 | 612588 | 613591 | - | lnc_RNA | retained_intron |
| 369707 | enst00000650218 | sg00000285985 | linc02689-201 | 11 | 1350359 | 1364286 | + | lnc_RNA | lncrna |
| -378254 | enst00000532550 | sg00000070047 | phrf1-204 | 11 | 601657 | 606842 | + | lnc_RNA | retained_intron |
| -403390 | enst00000533464 | sg00000070047 | phrf1-205 | 11 | 576521 | 611964 | + | mRNA | protein_coding |
| -403390 | enst00000413872 | sg00000070047 | phrf1-202 | 11 | 576521 | 611964 | + | mRNA | protein_coding |
| -403425 | enst00000534320 | sg00000070047 | phrf1-206 | 11 | 576486 | 612043 | + | mRNA | nonsense_mediated_decay |
| -403441 | enst00000264555 | sg00000070047 | phrf1-201 | 11 | 576470 | 612222 | + | mRNA | protein_coding |
| -403441 | enst00000416188 | sg00000070047 | phrf1-203 | 11 | 576470 | 611964 | + | mRNA | protein_coding |
| 409247 | enst00000308219 | sg00000174672 | brsk2-201 | 11 | 1389899 | 1462685 | + | mRNA | protein_coding |
| 409249 | enst00000531197 | sg00000174672 | brsk2-212 | 11 | 1389901 | 1461714 | + | mRNA | protein_coding |
| 409249 | enst00000529433 | sg00000174672 | brsk2-209 | 11 | 1389901 | 1461714 | + | mRNA | nonsense_mediated_decay |
| 409282 | enst00000528841 | sg00000174672 | brsk2-208 | 11 | 1389934 | 1462689 | + | mRNA | protein_coding |
| 409633 | enst00000526678 | sg00000174672 | brsk2-204 | 11 | 1390285 | 1457040 | + | mRNA | protein_coding |
| -411454 | enst00000533920 | sg00000247095 | mir210hg-203 | 11 | 567144 | 568457 | - | lnc_RNA | lncrna |
| -411491 | enst00000500447 | sg00000247095 | mir210hg-201 | 11 | 565660 | 568420 | - | lnc_RNA | lncrna |
| -411494 | enst00000665964 | sg00000247095 | mir210hg-205 | 11 | 565958 | 568417 | - | lnc_RNA | lncrna |
| -411503 | enst00000528245 | sg00000247095 | mir210hg-202 | 11 | 567083 | 568408 | - | lnc_RNA | lncrna |
| -411542 | enst00000534540 | sg00000247095 | mir210hg-204 | 11 | 567526 | 568369 | - | lnc_RNA | lncrna |
| -411713 | enst00000362168 | sg00000199038 | mir210-201 | 11 | 568089 | 568198 | - | miRNA | mirna |
| -417526 | enst00000531112 | sg00000099849 | rassf7-208 | 11 | 562385 | 563685 | + | mRNA | nonsense_mediated_decay |
| -418364 | enst00000528736 | sg00000099849 | rassf7-207 | 11 | 561547 | 562205 | + | mRNA | protein_coding |
| -418461 | enst00000454668 | sg00000099849 | rassf7-205 | 11 | 561450 | 564021 | + | mRNA | protein_coding |
| -418924 | enst00000524468 | sg00000099849 | rassf7-206 | 11 | 560987 | 562456 | + | lnc_RNA | processed_transcript |
| -418940 | enst00000414138 | sg00000099849 | rassf7-203 | 11 | 560971 | 563980 | + | mRNA | nonsense_mediated_decay |
| -418941 | enst00000397583 | sg00000099849 | rassf7-202 | 11 | 560970 | 564025 | + | mRNA | protein_coding |
| -418955 | enst00000397582 | sg00000099849 | rassf7-201 | 11 | 560956 | 564012 | + | mRNA | protein_coding |
| -419173 | enst00000329451 | sg00000185522 | lmntd2-201 | 11 | 554850 | 560738 | - | mRNA | protein_coding |
| -419181 | enst00000441853 | sg00000185522 | lmntd2-202 | 11 | 556926 | 560730 | - | mRNA | protein_coding |
| -419507 | enst00000431809 | sg00000099849 | rassf7-204 | 11 | 560404 | 563993 | + | mRNA | protein_coding |
| -419768 | enst00000492515 | sg00000185522 | lmntd2-205 | 11 | 558476 | 560143 | - | lnc_RNA | retained_intron |
| -420435 | enst00000533844 | sg00000254815 | lmntd2-as1-203 | 11 | 559476 | 560107 | + | lnc_RNA | lncrna |
| -420436 | enst00000659402 | sg00000254815 | lmntd2-as1-204 | 11 | 559475 | 560107 | + | lnc_RNA | lncrna |
| -420529 | enst00000486629 | sg00000185522 | lmntd2-204 | 11 | 557399 | 559382 | - | mRNA | protein_coding |
| -421019 | enst00000527113 | sg00000254815 | lmntd2-as1-201 | 11 | 558892 | 560106 | + | lnc_RNA | lncrna |
| -422316 | enst00000527620 | sg00000254815 | lmntd2-as1-202 | 11 | 557595 | 560106 | + | lnc_RNA | lncrna |
| -423491 | enst00000469990 | sg00000185522 | lmntd2-203 | 11 | 554855 | 556420 | - | lnc_RNA | retained_intron |
| 428748 | enst00000528596 | sg00000174672 | brsk2-206 | 11 | 1409400 | 1442516 | + | mRNA | protein_coding |
| 429107 | enst00000524702 | sg00000174672 | brsk2-203 | 11 | 1409759 | 1443340 | + | mRNA | protein_coding |
| 429791 | enst00000528710 | sg00000174672 | brsk2-207 | 11 | 1410443 | 1462090 | + | mRNA | protein_coding |
| 430500 | enst00000382179 | sg00000174672 | brsk2-202 | 11 | 1411152 | 1461745 | + | mRNA | protein_coding |
| -442384 | enst00000270115 | sg00000161328 | lrrc56-201 | 11 | 537527 | 554912 | + | mRNA | protein_coding |
| -442624 | enst00000468682 | sg00000174775 | hras-207 | 11 | 533795 | 537287 | - | lnc_RNA | processed_transcript |
| -444335 | enst00000311189 | sg00000174775 | hras-201 | 11 | 532242 | 535576 | - | mRNA | protein_coding |
| -444361 | enst00000417302 | sg00000174775 | hras-204 | 11 | 532243 | 535550 | - | mRNA | protein_coding |
| -444361 | enst00000451590 | sg00000174775 | hras-205 | 11 | 532243 | 535550 | - | mRNA | protein_coding |
| -444373 | enst00000493230 | sg00000174775 | hras-211 | 11 | 532242 | 535538 | - | mRNA | nonsense_mediated_decay |
| -444572 | enst00000397596 | sg00000174775 | hras-203 | 11 | 532242 | 535339 | - | mRNA | protein_coding |
| -445324 | enst00000482021 | sg00000174775 | hras-210 | 11 | 534279 | 534587 | - | lnc_RNA | processed_transcript |
| -445536 | enst00000397594 | sg00000174775 | hras-202 | 11 | 532242 | 534375 | - | mRNA | protein_coding |
| -445935 | enst00000479482 | sg00000174775 | hras-209 | 11 | 532642 | 533976 | - | lnc_RNA | processed_transcript |
| -446299 | enst00000478324 | sg00000174775 | hras-208 | 11 | 532242 | 533612 | - | lnc_RNA | processed_transcript |
| -446316 | enst00000462734 | sg00000174775 | hras-206 | 11 | 532246 | 533595 | - | lnc_RNA | processed_transcript |
| -451004 | enst00000526431 | sg00000254739 | ac137894.1-201 | 11 | 528907 | 529659 | + | lnc_RNA | lncrna |
| 460147 | enst00000529951 | sg00000174672 | brsk2-210 | 11 | 1440799 | 1461136 | + | mRNA | nonsense_mediated_decay |
| 461793 | enst00000531078 | sg00000174672 | brsk2-211 | 11 | 1442445 | 1445593 | + | lnc_RNA | retained_intron |
| -467398 | enst00000670787 | sg00000288033 | ac137894.3-201 | 11 | 512513 | 518134 | + | lnc_RNA | lncrna |
| 470006 | enst00000544817 | sg00000174672 | brsk2-215 | 11 | 1450658 | 1462087 | + | mRNA | protein_coding |
| 470033 | enst00000533606 | sg00000174672 | brsk2-214 | 11 | 1450685 | 1462689 | + | mRNA | protein_coding |
| -472611 | enst00000356187 | sg00000023191 | rnh1-202 | 11 | 494561 | 507300 | - | mRNA | protein_coding |
| -472647 | enst00000529115 | sg00000023191 | rnh1-214 | 11 | 498788 | 507264 | - | mRNA | nonsense_mediated_decay |
| -472652 | enst00000531149 | sg00000023191 | rnh1-218 | 11 | 499501 | 507259 | - | mRNA | protein_coding |
| -472654 | enst00000525701 | sg00000023191 | rnh1-210 | 11 | 494523 | 507257 | - | mRNA | nonsense_mediated_decay |
| -472658 | enst00000397604 | sg00000023191 | rnh1-203 | 11 | 494515 | 507253 | - | mRNA | protein_coding |
| -472669 | enst00000354420 | sg00000023191 | rnh1-201 | 11 | 494515 | 507242 | - | mRNA | protein_coding |
| -472684 | enst00000524464 | sg00000023191 | rnh1-207 | 11 | 495008 | 507227 | - | mRNA | nonsense_mediated_decay |
| -472693 | enst00000533410 | sg00000023191 | rnh1-222 | 11 | 494546 | 507218 | - | mRNA | protein_coding |
| -472699 | enst00000524780 | sg00000023191 | rnh1-208 | 11 | 499400 | 507212 | - | lnc_RNA | retained_intron |
| -472716 | enst00000528713 | sg00000023191 | rnh1-213 | 11 | 499897 | 507195 | - | lnc_RNA | retained_intron |
| -473090 | enst00000397614 | sg00000023191 | rnh1-204 | 11 | 494513 | 506821 | - | mRNA | protein_coding |
| -473111 | enst00000397615 | sg00000023191 | rnh1-205 | 11 | 494515 | 506800 | - | mRNA | protein_coding |
| -473115 | enst00000527485 | sg00000023191 | rnh1-212 | 11 | 499031 | 506796 | - | mRNA | protein_coding |
| -473126 | enst00000438658 | sg00000023191 | rnh1-206 | 11 | 494548 | 506785 | - | mRNA | protein_coding |
| -473152 | enst00000529306 | sg00000023191 | rnh1-215 | 11 | 499062 | 506759 | - | mRNA | protein_coding |
| 473186 | enst00000526768 | sg00000174672 | brsk2-205 | 11 | 1453838 | 1461740 | + | lnc_RNA | retained_intron |
| -473555 | enst00000526295 | sg00000023191 | rnh1-211 | 11 | 502214 | 506356 | - | lnc_RNA | processed_transcript |
| -473572 | enst00000531540 | sg00000023191 | rnh1-220 | 11 | 502137 | 506339 | - | mRNA | protein_coding |
| -473595 | enst00000532055 | sg00000023191 | rnh1-221 | 11 | 500635 | 506316 | - | mRNA | protein_coding |
| 473775 | enst00000531932 | sg00000174672 | brsk2-213 | 11 | 1454427 | 1459447 | + | lnc_RNA | retained_intron |
| -474030 | enst00000525522 | sg00000023191 | rnh1-209 | 11 | 494516 | 505881 | - | lnc_RNA | retained_intron |
| -475359 | enst00000529368 | sg00000023191 | rnh1-216 | 11 | 499047 | 504552 | - | mRNA | protein_coding |
| -476341 | enst00000534797 | sg00000023191 | rnh1-224 | 11 | 494512 | 503570 | - | mRNA | protein_coding |
| -476728 | enst00000533592 | sg00000023191 | rnh1-223 | 11 | 500840 | 503183 | - | lnc_RNA | processed_transcript |
| -477696 | enst00000531223 | sg00000023191 | rnh1-219 | 11 | 499677 | 502215 | - | lnc_RNA | retained_intron |
| -480982 | enst00000529768 | sg00000023191 | rnh1-217 | 11 | 494544 | 498929 | - | mRNA | protein_coding |
| 486980 | enst00000650363 | sg00000285581 | ac091196.1-201 | 11 | 1464582 | 1467632 | - | lnc_RNA | lncrna |
| -490120 | enst00000530029 | sg00000174915 | ptdss2-209 | 11 | 489791 | 490720 | + | lnc_RNA | retained_intron |
| -490561 | enst00000531411 | sg00000174915 | ptdss2-211 | 11 | 489350 | 490546 | + | lnc_RNA | retained_intron |
| -492672 | enst00000527325 | sg00000174915 | ptdss2-206 | 11 | 487239 | 489730 | + | lnc_RNA | retained_intron |
| 492784 | enst00000531976 | sg00000182208 | mob2-206 | 11 | 1469457 | 1473436 | - | lnc_RNA | retained_intron |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc