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CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #64 | 17 | 28384274 | 28385453 | 1179 | 3 | 49 | 2.5775e-20 | 4.0052e-18 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| 0 | enst00000585453 | sg00000004139 | sarm1-207 | 17 | 28384670 | 28398163 | + | lnc_RNA | retained_intron |
| 0 | enst00000582323 | sg00000004139 | sarm1-206 | 17 | 28384826 | 28388394 | + | mRNA | nonsense_mediated_decay |
| 0 | enst00000578128 | sg00000004139 | sarm1-203 | 17 | 28385100 | 28396411 | + | mRNA | protein_coding |
| 0 | enst00000577870 | sg00000004139 | sarm1-202 | 17 | 28385431 | 28396198 | + | lnc_RNA | retained_intron |
| 2545 | enst00000580711 | sg00000004139 | sarm1-205 | 17 | 28387998 | 28395978 | + | lnc_RNA | retained_intron |
| 2817 | enst00000579593 | sg00000004139 | sarm1-204 | 17 | 28388270 | 28396820 | + | mRNA | protein_coding |
| -9973 | enst00000623773 | sg00000279532 | ac002094.5-201 | 17 | 28373673 | 28374301 | - | unconfirmed_transcript | tec |
| -11018 | enst00000613598 | sg00000277450 | ac002094.4-201 | 17 | 28373256 | 28373562 | + | lnc_RNA | lncrna |
| -11183 | enst00000542029 | sg00000109072 | vtn-203 | 17 | 28369682 | 28373091 | - | mRNA | protein_coding |
| -12580 | enst00000585482 | sg00000004139 | sarm1-208 | 17 | 28371694 | 28404049 | + | mRNA | protein_coding |
| -13967 | enst00000226218 | sg00000109072 | vtn-201 | 17 | 28367284 | 28370307 | - | mRNA | protein_coding |
| -15337 | enst00000539746 | sg00000109072 | vtn-202 | 17 | 28367868 | 28368937 | - | lnc_RNA | retained_intron |
| 15592 | enst00000619923 | sg00000076351 | slc46a1-209 | 17 | 28400518 | 28401045 | - | lnc_RNA | retained_intron |
| -16262 | enst00000555059 | sg00000273171 | ac002094.3-201 | 17 | 28364288 | 28368012 | - | mRNA | protein_coding |
| -19030 | enst00000536498 | sg00000274529 | sebox-201 | 17 | 28364268 | 28365244 | - | mRNA | protein_coding |
| 19368 | enst00000582735 | sg00000076351 | slc46a1-204 | 17 | 28399346 | 28404821 | - | mRNA | protein_coding |
| 19787 | enst00000580714 | sg00000265254 | ac015917.2-201 | 17 | 28405240 | 28406796 | + | lnc_RNA | lncrna |
| -19918 | enst00000379061 | sg00000004139 | sarm1-201 | 17 | 28364356 | 28398135 | + | lnc_RNA | processed_transcript |
| 20294 | enst00000578217 | sg00000076351 | slc46a1-201 | 17 | 28404240 | 28405747 | - | lnc_RNA | processed_transcript |
| 20715 | enst00000582590 | sg00000076351 | slc46a1-203 | 17 | 28404316 | 28406168 | - | lnc_RNA | retained_intron |
| 20748 | enst00000618626 | sg00000076351 | slc46a1-208 | 17 | 28395676 | 28406201 | - | mRNA | protein_coding |
| 20759 | enst00000612814 | sg00000076351 | slc46a1-207 | 17 | 28394642 | 28406212 | - | mRNA | protein_coding |
| 21146 | enst00000584426 | sg00000076351 | slc46a1-205 | 17 | 28405048 | 28406599 | - | mRNA | protein_coding |
| 21177 | enst00000584995 | sg00000076351 | slc46a1-206 | 17 | 28404724 | 28406630 | - | mRNA | protein_coding |
| -21415 | enst00000577850 | sg00000265618 | ac002094.2-201 | 17 | 28361601 | 28362859 | - | lnc_RNA | lncrna |
| 21744 | enst00000581516 | sg00000076351 | slc46a1-202 | 17 | 28405377 | 28407197 | - | mRNA | protein_coding |
| -23620 | enst00000585070 | sg00000284532 | mir4723-201 | 17 | 28360654 | 28360734 | + | miRNA | mirna |
| -24036 | enst00000585027 | sg00000244045 | tmem199-209 | 17 | 28360238 | 28361295 | + | lnc_RNA | retained_intron |
| -25087 | enst00000509083 | sg00000244045 | tmem199-204 | 17 | 28359187 | 28361108 | + | lnc_RNA | retained_intron |
| -26231 | enst00000395404 | sg00000244045 | tmem199-202 | 17 | 28358043 | 28361455 | + | mRNA | protein_coding |
| -26566 | enst00000483505 | sg00000244045 | tmem199-203 | 17 | 28357708 | 28361234 | + | lnc_RNA | retained_intron |
| -26617 | enst00000581386 | sg00000244045 | tmem199-208 | 17 | 28357657 | 28359611 | + | lnc_RNA | processed_transcript |
| -26622 | enst00000579762 | sg00000244045 | tmem199-206 | 17 | 28357652 | 28358468 | + | lnc_RNA | processed_transcript |
| -26627 | enst00000292114 | sg00000244045 | tmem199-201 | 17 | 28357647 | 28363683 | + | mRNA | protein_coding |
| -26627 | enst00000580868 | sg00000244045 | tmem199-207 | 17 | 28357647 | 28361229 | + | mRNA | nonsense_mediated_decay |
| -26627 | enst00000591482 | sg00000258924 | ac002094.1-201 | 17 | 28357647 | 28381697 | + | lnc_RNA | lncrna |
| -26632 | enst00000555264 | sg00000244045 | tmem199-205 | 17 | 28357642 | 28361177 | + | mRNA | nonsense_mediated_decay |
| -26747 | enst00000540200 | sg00000004142 | poldip2-201 | 17 | 28346633 | 28357527 | - | mRNA | protein_coding |
| -26811 | enst00000618887 | sg00000004142 | poldip2-202 | 17 | 28347661 | 28357463 | - | mRNA | protein_coding |
| 31469 | enst00000583907 | sg00000265541 | h3p41-201 | 17 | 28416922 | 28417492 | + | pseudogenic_transcript | unprocessed_pseudogene |
| -43868 | enst00000577535 | sg00000109079 | tnfaip1-203 | 17 | 28340406 | 28342512 | + | mRNA | protein_coding |
| -47807 | enst00000582302 | sg00000109079 | tnfaip1-205 | 17 | 28336467 | 28340478 | + | mRNA | protein_coding |
| -48513 | enst00000226225 | sg00000109079 | tnfaip1-201 | 17 | 28335761 | 28347009 | + | mRNA | protein_coding |
| -48513 | enst00000583213 | sg00000109079 | tnfaip1-206 | 17 | 28335761 | 28344510 | + | lnc_RNA | processed_transcript |
| -48621 | enst00000578158 | sg00000109079 | tnfaip1-204 | 17 | 28335653 | 28340425 | + | mRNA | protein_coding |
| -48672 | enst00000544907 | sg00000109079 | tnfaip1-202 | 17 | 28335602 | 28345255 | + | mRNA | protein_coding |
| -48785 | enst00000588477 | sg00000109083 | ift20-216 | 17 | 28328325 | 28335489 | - | mRNA | protein_coding |
| -48785 | enst00000580357 | sg00000109083 | ift20-210 | 17 | 28331386 | 28335489 | - | lnc_RNA | retained_intron |
| -48796 | enst00000578547 | sg00000109083 | ift20-207 | 17 | 28331402 | 28335478 | - | lnc_RNA | retained_intron |
| -48802 | enst00000580991 | sg00000109083 | ift20-211 | 17 | 28331603 | 28335472 | - | lnc_RNA | retained_intron |
| -48804 | enst00000582797 | sg00000109083 | ift20-212 | 17 | 28329685 | 28335470 | - | lnc_RNA | retained_intron |
| -48805 | enst00000357896 | sg00000109083 | ift20-202 | 17 | 28328327 | 28335469 | - | mRNA | protein_coding |
| -48819 | enst00000322326 | sg00000109083 | ift20-201 | 17 | 28330191 | 28335455 | - | lnc_RNA | retained_intron |
| -48825 | enst00000585089 | sg00000109083 | ift20-214 | 17 | 28328329 | 28335449 | - | mRNA | protein_coding |
| -48830 | enst00000577498 | sg00000109083 | ift20-204 | 17 | 28330477 | 28335444 | - | mRNA | protein_coding |
| -48834 | enst00000395418 | sg00000109083 | ift20-203 | 17 | 28328329 | 28335440 | - | mRNA | protein_coding |
| -48834 | enst00000578985 | sg00000109083 | ift20-208 | 17 | 28328999 | 28335440 | - | mRNA | protein_coding |
| -48835 | enst00000579419 | sg00000109083 | ift20-209 | 17 | 28328326 | 28335439 | - | mRNA | protein_coding |
| -48835 | enst00000585313 | sg00000109083 | ift20-215 | 17 | 28328337 | 28335439 | - | mRNA | protein_coding |
| -48839 | enst00000578122 | sg00000109083 | ift20-206 | 17 | 28328887 | 28335435 | - | mRNA | protein_coding |
| -52298 | enst00000578009 | sg00000109083 | ift20-205 | 17 | 28328327 | 28331976 | - | mRNA | protein_coding |
| -54464 | enst00000583796 | sg00000109083 | ift20-213 | 17 | 28328326 | 28329810 | - | lnc_RNA | retained_intron |
| 60110 | enst00000579654 | sg00000263870 | ac015917.1-201 | 17 | 28444063 | 28445563 | - | pseudogenic_transcript | unprocessed_pseudogene |
| -64819 | enst00000336687 | sg00000109084 | tmem97-202 | 17 | 28319455 | 28328225 | + | mRNA | protein_coding |
| -65005 | enst00000582384 | sg00000109084 | tmem97-204 | 17 | 28319269 | 28327511 | + | mRNA | protein_coding |
| -65068 | enst00000582113 | sg00000109084 | tmem97-203 | 17 | 28319206 | 28325835 | + | mRNA | protein_coding |
| -65072 | enst00000583381 | sg00000109084 | tmem97-205 | 17 | 28319202 | 28326875 | + | mRNA | protein_coding |
| -65074 | enst00000226230 | sg00000109084 | tmem97-201 | 17 | 28319200 | 28328685 | + | mRNA | protein_coding |
| -66491 | enst00000578578 | sg00000265480 | krt18p55-202 | 17 | 28276045 | 28317783 | - | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| -76892 | enst00000577198 | sg00000265480 | krt18p55-201 | 17 | 28275986 | 28307382 | - | lnc_RNA | processed_transcript |
| -76892 | enst00000581956 | sg00000265480 | krt18p55-203 | 17 | 28277218 | 28307382 | - | lnc_RNA | processed_transcript |
| 82369 | enst00000571702 | sg00000263266 | rps7p1-201 | 17 | 28467822 | 28468406 | + | pseudogenic_transcript | processed_pseudogene |
| 87840 | enst00000444914 | sg00000007216 | slc13a2-202 | 17 | 28473293 | 28497778 | + | mRNA | protein_coding |
| 87840 | enst00000314669 | sg00000007216 | slc13a2-201 | 17 | 28473293 | 28497781 | + | mRNA | protein_coding |
| 88193 | enst00000545060 | sg00000007216 | slc13a2-205 | 17 | 28473646 | 28493903 | + | mRNA | protein_coding |
| 88239 | enst00000577903 | sg00000007216 | slc13a2-206 | 17 | 28473692 | 28497318 | + | mRNA | nonsense_mediated_decay |
| 88285 | enst00000541739 | sg00000007216 | slc13a2-204 | 17 | 28473738 | 28494076 | + | lnc_RNA | retained_intron |
| 88285 | enst00000459818 | sg00000007216 | slc13a2-203 | 17 | 28473738 | 28497778 | + | mRNA | nonsense_mediated_decay |
| 88285 | enst00000579281 | sg00000007216 | slc13a2-207 | 17 | 28473738 | 28497694 | + | mRNA | nonsense_mediated_decay |
| -108558 | enst00000583209 | sg00000264029 | ac061975.3-201 | 17 | 28274657 | 28275716 | - | pseudogenic_transcript | unprocessed_pseudogene |
| -111909 | enst00000584928 | sg00000266306 | ac061975.5-201 | 17 | 28269203 | 28272365 | - | pseudogenic_transcript | unprocessed_pseudogene |
| -117905 | enst00000564762 | sg00000260777 | ac061975.1-201 | 17 | 28263634 | 28266369 | - | lnc_RNA | lncrna |
| 120790 | enst00000577936 | sg00000109101 | foxn1-202 | 17 | 28506243 | 28524731 | + | mRNA | protein_coding |
| 120807 | enst00000579795 | sg00000109101 | foxn1-203 | 17 | 28506260 | 28537436 | + | mRNA | protein_coding |
| -127605 | enst00000581722 | sg00000263788 | ac061975.2-201 | 17 | 28256375 | 28256669 | - | pseudogenic_transcript | processed_pseudogene |
| -127836 | enst00000578466 | sg00000264486 | ac061975.4-201 | 17 | 28256438 | 28265551 | + | lnc_RNA | lncrna |
| -136268 | enst00000579045 | sg00000266830 | ac061975.6-201 | 17 | 28246454 | 28248006 | - | lnc_RNA | lncrna |
| -136830 | enst00000582808 | sg00000265060 | ppy2p-201 | 17 | 28247444 | 28248289 | + | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| -136830 | enst00000583761 | sg00000265060 | ppy2p-202 | 17 | 28247444 | 28248289 | + | lnc_RNA | processed_transcript |
| 138488 | enst00000226247 | sg00000109101 | foxn1-201 | 17 | 28523941 | 28538896 | + | mRNA | protein_coding |
| -148993 | enst00000592016 | sg00000267259 | erve-1-201 | 17 | 28232590 | 28235281 | - | lnc_RNA | lncrna |
| -156968 | enst00000315776 | sg00000237575 | pyy2-201 | 17 | 28227306 | 28227701 | + | pseudogenic_transcript | transcribed_unprocessed_pseudogene |
| -157711 | enst00000441253 | sg00000237575 | pyy2-202 | 17 | 28226563 | 28228065 | + | lnc_RNA | processed_transcript |
| 162720 | enst00000487844 | sg00000109103 | unc119-206 | 17 | 28547688 | 28548173 | - | lnc_RNA | retained_intron |
| 163946 | enst00000470125 | sg00000109103 | unc119-204 | 17 | 28546711 | 28549399 | - | mRNA | protein_coding |
| -164989 | enst00000587058 | sg00000267644 | ac061975.7-201 | 17 | 28219285 | 28220005 | + | lnc_RNA | lncrna |
| 166349 | enst00000484980 | sg00000109103 | unc119-205 | 17 | 28546708 | 28551802 | - | mRNA | protein_coding |
| 167096 | enst00000581945 | sg00000109103 | unc119-208 | 17 | 28547524 | 28552549 | - | mRNA | protein_coding |
| 167156 | enst00000444148 | sg00000109103 | unc119-203 | 17 | 28547642 | 28552609 | - | mRNA | protein_coding |
| 167171 | enst00000335765 | sg00000109103 | unc119-202 | 17 | 28546708 | 28552624 | - | mRNA | protein_coding |
| 167172 | enst00000578434 | sg00000109103 | unc119-207 | 17 | 28551825 | 28552625 | - | lnc_RNA | retained_intron |
| 167178 | enst00000301032 | sg00000109103 | unc119-201 | 17 | 28546708 | 28552631 | - | mRNA | protein_coding |
| 171376 | enst00000487231 | sg00000087111 | pigs-206 | 17 | 28553387 | 28556829 | - | lnc_RNA | retained_intron |
| 172050 | enst00000492429 | sg00000087111 | pigs-207 | 17 | 28553387 | 28557503 | - | lnc_RNA | retained_intron |
| 174895 | enst00000484580 | sg00000087111 | pigs-205 | 17 | 28556469 | 28560348 | - | lnc_RNA | retained_intron |
| 176344 | enst00000577620 | sg00000087111 | pigs-209 | 17 | 28558502 | 28561797 | - | lnc_RNA | retained_intron |
| 178199 | enst00000582615 | sg00000087111 | pigs-211 | 17 | 28556962 | 28563652 | - | lnc_RNA | retained_intron |
| 178206 | enst00000465444 | sg00000087111 | pigs-204 | 17 | 28558502 | 28563659 | - | lnc_RNA | processed_transcript |
| 178208 | enst00000580968 | sg00000087111 | pigs-210 | 17 | 28558502 | 28563661 | - | lnc_RNA | processed_transcript |
| -179658 | enst00000658960 | sg00000287721 | ac061975.8-201 | 17 | 28204616 | 28223735 | + | lnc_RNA | lncrna |
| 186051 | enst00000583631 | sg00000087111 | pigs-213 | 17 | 28563818 | 28571504 | - | lnc_RNA | retained_intron |
| 186057 | enst00000577594 | sg00000087111 | pigs-208 | 17 | 28563727 | 28571510 | - | lnc_RNA | retained_intron |
| 186071 | enst00000308360 | sg00000087111 | pigs-202 | 17 | 28553387 | 28571524 | - | mRNA | protein_coding |
| 186075 | enst00000268758 | sg00000087111 | pigs-201 | 17 | 28553383 | 28571528 | - | mRNA | nonsense_mediated_decay |
| 186083 | enst00000395346 | sg00000087111 | pigs-203 | 17 | 28553387 | 28571536 | - | mRNA | protein_coding |
| 186085 | enst00000582721 | sg00000087111 | pigs-212 | 17 | 28563432 | 28571538 | - | mRNA | nonsense_mediated_decay |
| 186087 | enst00000584080 | sg00000087111 | pigs-214 | 17 | 28558522 | 28571540 | - | mRNA | nonsense_mediated_decay |
| 186341 | enst00000584413 | sg00000087111 | pigs-215 | 17 | 28563828 | 28571794 | - | lnc_RNA | processed_transcript |
| 187664 | enst00000585189 | sg00000265168 | ac005726.3-201 | 17 | 28573117 | 28574243 | + | lnc_RNA | lncrna |
| 190461 | enst00000460201 | sg00000109107 | aldoc-205 | 17 | 28574696 | 28575914 | - | mRNA | protein_coding |
| 190945 | enst00000435638 | sg00000109107 | aldoc-204 | 17 | 28574788 | 28576398 | - | mRNA | protein_coding |
| 190971 | enst00000578590 | sg00000109107 | aldoc-206 | 17 | 28574964 | 28576424 | - | mRNA | protein_coding |
| 191432 | enst00000395319 | sg00000109107 | aldoc-202 | 17 | 28573115 | 28576885 | - | mRNA | protein_coding |
| 191438 | enst00000582381 | sg00000109107 | aldoc-208 | 17 | 28574979 | 28576891 | - | lnc_RNA | retained_intron |
| 191441 | enst00000581807 | sg00000109107 | aldoc-207 | 17 | 28574714 | 28576894 | - | mRNA | protein_coding |
| 191442 | enst00000226253 | sg00000109107 | aldoc-201 | 17 | 28573120 | 28576895 | - | mRNA | protein_coding |
| 191442 | enst00000584086 | sg00000109107 | aldoc-209 | 17 | 28574710 | 28576895 | - | mRNA | protein_coding |
| 191495 | enst00000395321 | sg00000109107 | aldoc-203 | 17 | 28573115 | 28576948 | - | mRNA | protein_coding |
| 192977 | enst00000580377 | sg00000076382 | spag5-208 | 17 | 28577565 | 28578430 | - | lnc_RNA | retained_intron |
| 193282 | enst00000582175 | sg00000076382 | spag5-215 | 17 | 28577570 | 28578735 | - | lnc_RNA | retained_intron |
| -193333 | enst00000584878 | sg00000087095 | nlk-206 | 17 | 28190941 | 28194985 | + | lnc_RNA | retained_intron |
| 193799 | enst00000580676 | sg00000076382 | spag5-211 | 17 | 28577603 | 28579252 | - | lnc_RNA | retained_intron |
| 193953 | enst00000582076 | sg00000076382 | spag5-214 | 17 | 28577580 | 28579406 | - | mRNA | protein_coding |
| 194633 | enst00000581133 | sg00000076382 | spag5-213 | 17 | 28578377 | 28580086 | - | lnc_RNA | retained_intron |
| 194718 | enst00000580682 | sg00000076382 | spag5-212 | 17 | 28579160 | 28580171 | - | lnc_RNA | retained_intron |
| 195319 | enst00000580406 | sg00000076382 | spag5-209 | 17 | 28579400 | 28580772 | - | lnc_RNA | retained_intron |
| 198165 | enst00000578230 | sg00000076382 | spag5-205 | 17 | 28579816 | 28583618 | - | mRNA | nonsense_mediated_decay |
| 198173 | enst00000577259 | sg00000076382 | spag5-204 | 17 | 28579209 | 28583626 | - | lnc_RNA | retained_intron |
| 199209 | enst00000378976 | sg00000076382 | spag5-202 | 17 | 28579754 | 28584662 | - | mRNA | nonsense_mediated_decay |
| 200545 | enst00000580083 | sg00000076382 | spag5-207 | 17 | 28580009 | 28585998 | - | mRNA | nonsense_mediated_decay |
| 206300 | enst00000584206 | sg00000076382 | spag5-216 | 17 | 28584426 | 28591753 | - | mRNA | protein_coding |
| -213041 | enst00000584188 | sg00000087095 | nlk-205 | 17 | 28171233 | 28191172 | + | lnc_RNA | processed_transcript |
| 213337 | enst00000414744 | sg00000227543 | spag5-as1-201 | 17 | 28598790 | 28617377 | + | lnc_RNA | lncrna |
| 213544 | enst00000580567 | sg00000076382 | spag5-210 | 17 | 28591698 | 28598997 | - | mRNA | nonsense_mediated_decay |
| 213546 | enst00000536674 | sg00000076382 | spag5-203 | 17 | 28592472 | 28598999 | - | mRNA | protein_coding |
| 213552 | enst00000578479 | sg00000076382 | spag5-206 | 17 | 28591698 | 28599005 | - | mRNA | nonsense_mediated_decay |
| 213572 | enst00000321765 | sg00000076382 | spag5-201 | 17 | 28577574 | 28599025 | - | mRNA | protein_coding |
| 213680 | enst00000556050 | sg00000227543 | spag5-as1-204 | 17 | 28599133 | 28606910 | + | lnc_RNA | lncrna |
| 213703 | enst00000554154 | sg00000227543 | spag5-as1-203 | 17 | 28599156 | 28616526 | + | lnc_RNA | lncrna |
| 214193 | enst00000670419 | sg00000227543 | spag5-as1-206 | 17 | 28599646 | 28617347 | + | lnc_RNA | lncrna |
| 222510 | enst00000579019 | sg00000265287 | ac005726.4-201 | 17 | 28607963 | 28609730 | + | lnc_RNA | lncrna |
| 225485 | enst00000579457 | sg00000167524 | rskr-210 | 17 | 28607964 | 28610938 | - | lnc_RNA | retained_intron |
| 226479 | enst00000424210 | sg00000227543 | spag5-as1-202 | 17 | 28611932 | 28617375 | + | lnc_RNA | lncrna |
| 226913 | enst00000494272 | sg00000167524 | rskr-204 | 17 | 28610420 | 28612366 | - | lnc_RNA | retained_intron |
| 228156 | enst00000461399 | sg00000167524 | rskr-202 | 17 | 28612326 | 28613609 | - | lnc_RNA | retained_intron |
| 228367 | enst00000527918 | sg00000167524 | rskr-207 | 17 | 28612339 | 28613820 | - | lnc_RNA | retained_intron |
| 228729 | enst00000527863 | sg00000167524 | rskr-206 | 17 | 28612978 | 28614182 | - | lnc_RNA | retained_intron |
| 228730 | enst00000530121 | sg00000167524 | rskr-208 | 17 | 28612343 | 28614183 | - | mRNA | protein_coding |
| 228730 | enst00000481916 | sg00000258472 | ac005726.1-201 | 17 | 28455752 | 28614183 | - | mRNA | nonsense_mediated_decay |
| 228732 | enst00000526073 | sg00000167524 | rskr-205 | 17 | 28611797 | 28614185 | - | lnc_RNA | processed_transcript |
| 228732 | enst00000577790 | sg00000167524 | rskr-209 | 17 | 28601827 | 28614185 | - | mRNA | nonsense_mediated_decay |
| 228732 | enst00000531839 | sg00000258472 | ac005726.1-202 | 17 | 28580012 | 28614185 | - | mRNA | protein_coding |
| 228740 | enst00000581199 | sg00000167524 | rskr-211 | 17 | 28611544 | 28614193 | - | lnc_RNA | retained_intron |
| 228744 | enst00000469832 | sg00000167524 | rskr-203 | 17 | 28612599 | 28614197 | - | lnc_RNA | processed_transcript |
| 228744 | enst00000584196 | sg00000167524 | rskr-212 | 17 | 28603470 | 28614197 | - | mRNA | nonsense_mediated_decay |
| 228744 | enst00000301037 | sg00000167524 | rskr-201 | 17 | 28607964 | 28614197 | - | mRNA | protein_coding |
| 230231 | enst00000584675 | sg00000227543 | spag5-as1-205 | 17 | 28615684 | 28617372 | + | lnc_RNA | retained_intron |
| 231481 | enst00000583860 | sg00000007202 | kiaa0100-216 | 17 | 28616260 | 28616934 | - | lnc_RNA | retained_intron |
| 234322 | enst00000579924 | sg00000007202 | kiaa0100-208 | 17 | 28616667 | 28619775 | - | lnc_RNA | processed_transcript |
| 234607 | enst00000580395 | sg00000007202 | kiaa0100-209 | 17 | 28618718 | 28620060 | - | lnc_RNA | retained_intron |
| 247753 | enst00000583787 | sg00000264044 | ac005726.2-201 | 17 | 28633206 | 28634740 | + | lnc_RNA | lncrna |
| 247794 | enst00000577814 | sg00000264044 | ac005726.2-202 | 17 | 28633247 | 28635950 | + | lnc_RNA | lncrna |
| 248023 | enst00000582417 | sg00000007202 | kiaa0100-213 | 17 | 28632081 | 28633476 | - | lnc_RNA | retained_intron |
| 248200 | enst00000577261 | sg00000007202 | kiaa0100-204 | 17 | 28631484 | 28633653 | - | mRNA | protein_coding |
| 249217 | enst00000581064 | sg00000007202 | kiaa0100-211 | 17 | 28633686 | 28634670 | - | lnc_RNA | retained_intron |
| 256477 | enst00000581267 | sg00000007202 | kiaa0100-212 | 17 | 28639315 | 28641930 | - | mRNA | nonsense_mediated_decay |
| 256594 | enst00000579253 | sg00000007202 | kiaa0100-207 | 17 | 28640397 | 28642047 | - | lnc_RNA | retained_intron |
| 257028 | enst00000577580 | sg00000007202 | kiaa0100-206 | 17 | 28639966 | 28642481 | - | lnc_RNA | retained_intron |
| 257827 | enst00000582901 | sg00000007202 | kiaa0100-214 | 17 | 28642063 | 28643280 | - | lnc_RNA | retained_intron |
| 259658 | enst00000577417 | sg00000007202 | kiaa0100-205 | 17 | 28639316 | 28645111 | - | lnc_RNA | retained_intron |
| 259695 | enst00000583403 | sg00000007202 | kiaa0100-215 | 17 | 28639687 | 28645148 | - | mRNA | nonsense_mediated_decay |
| 259702 | enst00000580882 | sg00000007202 | kiaa0100-210 | 17 | 28639061 | 28645155 | - | lnc_RNA | retained_intron |
| 259705 | enst00000528896 | sg00000007202 | kiaa0100-202 | 17 | 28614446 | 28645158 | - | mRNA | protein_coding |
| 260001 | enst00000544884 | sg00000007202 | kiaa0100-203 | 17 | 28614878 | 28645454 | - | mRNA | protein_coding |
| 260001 | enst00000389003 | sg00000007202 | kiaa0100-201 | 17 | 28614882 | 28645454 | - | mRNA | protein_coding |
| -267868 | enst00000472363 | sg00000240873 | rps29p22-201 | 17 | 28116239 | 28116406 | - | pseudogenic_transcript | processed_pseudogene |
| 269882 | enst00000587788 | sg00000132581 | sdf2-206 | 17 | 28648743 | 28655335 | - | mRNA | protein_coding |
| 270104 | enst00000494679 | sg00000240494 | rps12p28-201 | 17 | 28655557 | 28655983 | + | pseudogenic_transcript | processed_pseudogene |
| 270869 | enst00000589788 | sg00000132581 | sdf2-208 | 17 | 28648971 | 28656322 | - | lnc_RNA | retained_intron |
| 272386 | enst00000587629 | sg00000132581 | sdf2-205 | 17 | 28648842 | 28657839 | - | lnc_RNA | processed_transcript |
| 276366 | enst00000591903 | sg00000132581 | sdf2-209 | 17 | 28648925 | 28661819 | - | mRNA | nonsense_mediated_decay |
| 276453 | enst00000247020 | sg00000132581 | sdf2-201 | 17 | 28648346 | 28661906 | - | mRNA | protein_coding |
| 276463 | enst00000585428 | sg00000132581 | sdf2-202 | 17 | 28660488 | 28661916 | - | lnc_RNA | processed_transcript |
| 276679 | enst00000588472 | sg00000132581 | sdf2-207 | 17 | 28648741 | 28662132 | - | lnc_RNA | processed_transcript |
| 276727 | enst00000585749 | sg00000132581 | sdf2-203 | 17 | 28648589 | 28662180 | - | lnc_RNA | processed_transcript |
| 276732 | enst00000592250 | sg00000132581 | sdf2-210 | 17 | 28648589 | 28662185 | - | lnc_RNA | processed_transcript |
| 276736 | enst00000587338 | sg00000132581 | sdf2-204 | 17 | 28649127 | 28662189 | - | lnc_RNA | processed_transcript |
| 276745 | enst00000347486 | sg00000109111 | supt6h-202 | 17 | 28662198 | 28701735 | + | mRNA | protein_coding |
| 276752 | enst00000314616 | sg00000109111 | supt6h-201 | 17 | 28662205 | 28702679 | + | mRNA | protein_coding |
| 285455 | enst00000577713 | sg00000109111 | supt6h-203 | 17 | 28670908 | 28674323 | + | mRNA | protein_coding |
| 287351 | enst00000578819 | sg00000265205 | ac010761.3-201 | 17 | 28670054 | 28672804 | - | lnc_RNA | lncrna |
| 287949 | enst00000584312 | sg00000109111 | supt6h-211 | 17 | 28673402 | 28674999 | + | mRNA | nonsense_mediated_decay |
| 289296 | enst00000584285 | sg00000109111 | supt6h-210 | 17 | 28674749 | 28675432 | + | lnc_RNA | retained_intron |
| 295676 | enst00000577939 | sg00000109111 | supt6h-204 | 17 | 28681129 | 28682188 | + | lnc_RNA | retained_intron |
| 301464 | enst00000581908 | sg00000109111 | supt6h-207 | 17 | 28686917 | 28689427 | + | lnc_RNA | retained_intron |
| 301897 | enst00000585230 | sg00000109111 | supt6h-212 | 17 | 28687350 | 28688535 | + | lnc_RNA | retained_intron |
| 303217 | enst00000583972 | sg00000109111 | supt6h-209 | 17 | 28688670 | 28691849 | + | lnc_RNA | retained_intron |
| 309557 | enst00000580471 | sg00000109111 | supt6h-205 | 17 | 28695010 | 28696883 | + | lnc_RNA | retained_intron |
| 312459 | enst00000581510 | sg00000109111 | supt6h-206 | 17 | 28697912 | 28701539 | + | lnc_RNA | retained_intron |
| 314336 | enst00000583340 | sg00000109111 | supt6h-208 | 17 | 28699789 | 28700464 | + | lnc_RNA | retained_intron |
| 320711 | enst00000584073 | sg00000167525 | proca1-210 | 17 | 28704084 | 28706164 | - | lnc_RNA | processed_transcript |
| 321996 | enst00000495203 | sg00000167525 | proca1-206 | 17 | 28703916 | 28707449 | - | lnc_RNA | retained_intron |
| -322307 | enst00000516474 | sg00000252283 | ac100852.1-201 | 17 | 28061967 | 28062068 | + | ncRNA | misc_rna |
| 322431 | enst00000415329 | sg00000167525 | proca1-202 | 17 | 28703714 | 28707884 | - | mRNA | protein_coding |
| 325633 | enst00000422880 | sg00000167525 | proca1-203 | 17 | 28704307 | 28711086 | - | lnc_RNA | processed_transcript |
| 325638 | enst00000578097 | sg00000167525 | proca1-207 | 17 | 28704531 | 28711091 | - | lnc_RNA | processed_transcript |
| 325846 | enst00000579650 | sg00000167525 | proca1-208 | 17 | 28704081 | 28711299 | - | lnc_RNA | processed_transcript |
| 326207 | enst00000439862 | sg00000167525 | proca1-204 | 17 | 28703516 | 28711660 | - | mRNA | protein_coding |
| 326229 | enst00000473751 | sg00000167525 | proca1-205 | 17 | 28704008 | 28711682 | - | mRNA | nonsense_mediated_decay |
| 326294 | enst00000581289 | sg00000167525 | proca1-209 | 17 | 28703625 | 28711747 | - | mRNA | protein_coding |
| 326401 | enst00000301039 | sg00000167525 | proca1-201 | 17 | 28703197 | 28711854 | - | mRNA | protein_coding |
| 330032 | enst00000484161 | sg00000109113 | rab34-217 | 17 | 28714287 | 28715485 | - | lnc_RNA | retained_intron |
| 330065 | enst00000496866 | sg00000109113 | rab34-218 | 17 | 28714906 | 28715518 | - | lnc_RNA | retained_intron |
| 330265 | enst00000474704 | sg00000109113 | rab34-213 | 17 | 28714299 | 28715718 | - | lnc_RNA | retained_intron |
| 330920 | enst00000481501 | sg00000109113 | rab34-214 | 17 | 28715439 | 28716373 | - | lnc_RNA | retained_intron |
| 331940 | enst00000422279 | sg00000109113 | rab34-208 | 17 | 28714291 | 28717393 | - | mRNA | nonsense_mediated_decay |
| 332254 | enst00000483554 | sg00000109113 | rab34-216 | 17 | 28716237 | 28717707 | - | lnc_RNA | retained_intron |
| 332255 | enst00000636513 | sg00000109113 | rab34-224 | 17 | 28715032 | 28717708 | - | mRNA | protein_coding |
| 332255 | enst00000636154 | sg00000109113 | rab34-223 | 17 | 28715829 | 28717708 | - | mRNA | protein_coding |
| 332295 | enst00000395243 | sg00000109113 | rab34-203 | 17 | 28714284 | 28717748 | - | mRNA | protein_coding |
| 332397 | enst00000636772 | sg00000109113 | rab34-226 | 17 | 28714793 | 28717850 | - | mRNA | protein_coding |
| 332415 | enst00000395245 | sg00000109113 | rab34-204 | 17 | 28714284 | 28717868 | - | mRNA | protein_coding |
| 332708 | enst00000436730 | sg00000109113 | rab34-210 | 17 | 28714625 | 28718161 | - | mRNA | protein_coding |
| 332713 | enst00000450529 | sg00000109113 | rab34-211 | 17 | 28714285 | 28718166 | - | mRNA | protein_coding |
| 332713 | enst00000625712 | sg00000109113 | rab34-222 | 17 | 28714284 | 28718166 | - | mRNA | protein_coding |
| 332714 | enst00000582934 | sg00000109113 | rab34-220 | 17 | 28716903 | 28718167 | - | mRNA | protein_coding |
| 332714 | enst00000482688 | sg00000109113 | rab34-215 | 17 | 28716756 | 28718167 | - | lnc_RNA | retained_intron |
| 332714 | enst00000580843 | sg00000109113 | rab34-219 | 17 | 28716053 | 28718167 | - | mRNA | protein_coding |
| 332714 | enst00000419712 | sg00000109113 | rab34-207 | 17 | 28715260 | 28718167 | - | mRNA | protein_coding |
| 332714 | enst00000583538 | sg00000109113 | rab34-221 | 17 | 28714673 | 28718167 | - | mRNA | protein_coding |
| 332730 | enst00000415040 | sg00000109113 | rab34-206 | 17 | 28714285 | 28718183 | - | mRNA | protein_coding |
| 332769 | enst00000353676 | sg00000109113 | rab34-202 | 17 | 28714873 | 28718222 | - | mRNA | protein_coding |
| 332815 | enst00000636534 | sg00000109113 | rab34-225 | 17 | 28715896 | 28718268 | - | mRNA | nonsense_mediated_decay |
| 332815 | enst00000453384 | sg00000109113 | rab34-212 | 17 | 28714281 | 28718268 | - | mRNA | protein_coding |
| 332952 | enst00000430132 | sg00000109113 | rab34-209 | 17 | 28714647 | 28718405 | - | mRNA | protein_coding |
| 332962 | enst00000301043 | sg00000109113 | rab34-201 | 17 | 28714284 | 28718415 | - | mRNA | protein_coding |
| 332976 | enst00000412625 | sg00000109113 | rab34-205 | 17 | 28714873 | 28718429 | - | mRNA | protein_coding |
| 334532 | enst00000422514 | sg00000198242 | rpl23a-204 | 17 | 28719985 | 28724359 | + | mRNA | protein_coding |
| 334538 | enst00000582736 | sg00000198242 | rpl23a-209 | 17 | 28719991 | 28721261 | + | lnc_RNA | retained_intron |
| 334626 | enst00000496182 | sg00000198242 | rpl23a-206 | 17 | 28720079 | 28723936 | + | mRNA | protein_coding |
| 334791 | enst00000394938 | sg00000198242 | rpl23a-203 | 17 | 28720244 | 28723936 | + | mRNA | protein_coding |
| 334811 | enst00000394935 | sg00000198242 | rpl23a-202 | 17 | 28720264 | 28723933 | + | mRNA | protein_coding |
| 334846 | enst00000355731 | sg00000198242 | rpl23a-201 | 17 | 28720299 | 28723992 | + | mRNA | protein_coding |
| 335097 | enst00000458893 | sg00000238423 | snord42b-201 | 17 | 28720550 | 28720616 | + | snoRNA | snorna |
| 335116 | enst00000472628 | sg00000198242 | rpl23a-205 | 17 | 28720569 | 28723936 | + | mRNA | protein_coding |
| 335252 | enst00000578181 | sg00000198242 | rpl23a-207 | 17 | 28720705 | 28723800 | + | mRNA | protein_coding |
| 337129 | enst00000459174 | sg00000238578 | snord4a-201 | 17 | 28722582 | 28722653 | + | snoRNA | snorna |
| 337424 | enst00000582718 | sg00000264577 | ac010761.1-201 | 17 | 28721487 | 28722877 | - | lnc_RNA | lncrna |
| 337847 | enst00000580755 | sg00000198242 | rpl23a-208 | 17 | 28723300 | 28723937 | + | lnc_RNA | retained_intron |
| 337976 | enst00000459584 | sg00000238649 | snord42a-201 | 17 | 28723429 | 28723492 | + | snoRNA | snorna |
| 338229 | enst00000459083 | sg00000238597 | snord4b-201 | 17 | 28723682 | 28723753 | + | snoRNA | snorna |
| 339397 | enst00000581236 | sg00000160606 | tlcd1-204 | 17 | 28724358 | 28724850 | - | mRNA | protein_coding |
| 340444 | enst00000579671 | sg00000160602 | nek8-204 | 17 | 28725897 | 28735367 | + | mRNA | protein_coding |
| 340467 | enst00000584342 | sg00000160602 | nek8-206 | 17 | 28725920 | 28735309 | + | lnc_RNA | retained_intron |
| 340475 | enst00000579060 | sg00000160602 | nek8-203 | 17 | 28725928 | 28735371 | + | mRNA | protein_coding |
| 340780 | enst00000292090 | sg00000160606 | tlcd1-201 | 17 | 28724348 | 28726233 | - | mRNA | protein_coding |
| -341244 | enst00000496808 | sg00000087095 | nlk-202 | 17 | 28043030 | 28196381 | + | mRNA | nonsense_mediated_decay |
| -341435 | enst00000582037 | sg00000087095 | nlk-203 | 17 | 28042839 | 28048926 | + | mRNA | protein_coding |
| 341479 | enst00000394933 | sg00000160606 | tlcd1-202 | 17 | 28724453 | 28726932 | - | mRNA | protein_coding |
| -341597 | enst00000407008 | sg00000087095 | nlk-201 | 17 | 28042677 | 28196381 | + | mRNA | protein_coding |
| 341805 | enst00000587898 | sg00000267729 | ac010761.6-201 | 17 | 28727258 | 28727739 | + | lnc_RNA | lncrna |
| 342482 | enst00000580518 | sg00000160606 | tlcd1-203 | 17 | 28724599 | 28727935 | - | mRNA | protein_coding |
| -342537 | enst00000583517 | sg00000087095 | nlk-204 | 17 | 28041737 | 28048324 | + | lnc_RNA | processed_transcript |
| 343335 | enst00000268766 | sg00000160602 | nek8-201 | 17 | 28728788 | 28743455 | + | mRNA | protein_coding |
| 343351 | enst00000543014 | sg00000160602 | nek8-202 | 17 | 28728804 | 28742429 | + | mRNA | nonsense_mediated_decay |
| 343361 | enst00000581000 | sg00000160602 | nek8-205 | 17 | 28728814 | 28734525 | + | lnc_RNA | retained_intron |
| 343363 | enst00000593261 | sg00000160602 | nek8-208 | 17 | 28728816 | 28735352 | + | lnc_RNA | processed_transcript |
| 349825 | enst00000592510 | sg00000160602 | nek8-207 | 17 | 28735278 | 28738245 | + | mRNA | protein_coding |
| 357312 | enst00000584779 | sg00000265073 | ac010761.2-201 | 17 | 28732963 | 28742765 | - | lnc_RNA | lncrna |
| 357649 | enst00000582536 | sg00000265073 | ac010761.2-202 | 17 | 28742230 | 28743102 | - | lnc_RNA | lncrna |
| 358552 | enst00000618771 | sg00000076604 | traf4-217 | 17 | 28744005 | 28749577 | + | mRNA | protein_coding |
| 358558 | enst00000262395 | sg00000076604 | traf4-201 | 17 | 28744011 | 28750956 | + | mRNA | protein_coding |
| 358565 | enst00000478021 | sg00000076604 | traf4-211 | 17 | 28744018 | 28745518 | + | mRNA | nonsense_mediated_decay |
| 358566 | enst00000461195 | sg00000076604 | traf4-207 | 17 | 28744019 | 28748423 | + | lnc_RNA | retained_intron |
| 358570 | enst00000498540 | sg00000076604 | traf4-212 | 17 | 28744023 | 28747732 | + | lnc_RNA | retained_intron |
| 358577 | enst00000422344 | sg00000076604 | traf4-204 | 17 | 28744030 | 28748326 | + | mRNA | protein_coding |
| 358583 | enst00000586813 | sg00000076604 | traf4-216 | 17 | 28744036 | 28748603 | + | mRNA | nonsense_mediated_decay |
| 358587 | enst00000444415 | sg00000076604 | traf4-205 | 17 | 28744040 | 28750037 | + | mRNA | protein_coding |
| 358602 | enst00000394925 | sg00000076604 | traf4-203 | 17 | 28744055 | 28747713 | + | lnc_RNA | retained_intron |
| 358632 | enst00000262396 | sg00000076604 | traf4-202 | 17 | 28744085 | 28749644 | + | mRNA | protein_coding |
| 358770 | enst00000475329 | sg00000076604 | traf4-210 | 17 | 28744223 | 28748326 | + | mRNA | nonsense_mediated_decay |
| 361290 | enst00000584944 | sg00000076604 | traf4-215 | 17 | 28746743 | 28748297 | + | mRNA | protein_coding |
| 361563 | enst00000473421 | sg00000076604 | traf4-209 | 17 | 28747016 | 28748423 | + | mRNA | protein_coding |
| 361761 | enst00000454852 | sg00000076604 | traf4-206 | 17 | 28747214 | 28749023 | + | mRNA | nonsense_mediated_decay |
| -361810 | enst00000365519 | sg00000202389 | ac090287.1-201 | 17 | 28022330 | 28022464 | - | snoRNA | snorna |
| -362009 | enst00000578374 | sg00000266190 | ac090287.3-201 | 17 | 28021668 | 28022265 | - | pseudogenic_transcript | unprocessed_pseudogene |
| 362129 | enst00000578917 | sg00000076604 | traf4-213 | 17 | 28747582 | 28748153 | + | lnc_RNA | retained_intron |
| 362199 | enst00000577325 | sg00000265474 | ac010761.4-201 | 17 | 28745569 | 28747652 | - | lnc_RNA | lncrna |
| 362277 | enst00000469529 | sg00000076604 | traf4-208 | 17 | 28747730 | 28749034 | + | lnc_RNA | retained_intron |
| 362671 | enst00000580073 | sg00000076604 | traf4-214 | 17 | 28748124 | 28748742 | + | lnc_RNA | retained_intron |
| 364626 | enst00000579468 | sg00000265840 | ac010761.5-201 | 17 | 28749731 | 28750079 | - | lnc_RNA | lncrna |
| -365504 | enst00000516009 | sg00000251818 | ac090287.2-201 | 17 | 28018770 | 28018907 | + | scRNA | scarna |
| 381651 | enst00000584059 | sg00000173065 | fam222b-215 | 17 | 28759828 | 28767104 | - | mRNA | protein_coding |
| 391718 | enst00000341217 | sg00000173065 | fam222b-201 | 17 | 28755978 | 28777171 | - | mRNA | protein_coding |
| -392487 | enst00000668365 | sg00000260019 | linc01992-206 | 17 | 27929084 | 27991787 | - | lnc_RNA | lncrna |
| -392508 | enst00000661257 | sg00000260019 | linc01992-204 | 17 | 27928924 | 27991766 | - | lnc_RNA | lncrna |
| -395403 | enst00000660253 | sg00000260019 | linc01992-203 | 17 | 27929539 | 27988871 | - | lnc_RNA | lncrna |
| -410051 | enst00000567574 | sg00000260019 | linc01992-201 | 17 | 27929548 | 27974223 | - | lnc_RNA | lncrna |
| 416991 | enst00000469001 | sg00000243053 | rpl31p58-201 | 17 | 28802444 | 28802822 | + | pseudogenic_transcript | processed_pseudogene |
| 426771 | enst00000582059 | sg00000173065 | fam222b-210 | 17 | 28759393 | 28812224 | - | mRNA | protein_coding |
| 426982 | enst00000452648 | sg00000173065 | fam222b-202 | 17 | 28757390 | 28812435 | - | mRNA | protein_coding |
| -447906 | enst00000654644 | sg00000260019 | linc01992-202 | 17 | 27929539 | 27936368 | - | lnc_RNA | lncrna |
| 449269 | enst00000459041 | sg00000238516 | ac024267.1-201 | 17 | 28834722 | 28834822 | + | ncRNA | misc_rna |
| -450184 | enst00000666961 | sg00000260019 | linc01992-205 | 17 | 27929539 | 27934090 | - | lnc_RNA | lncrna |
| -454097 | enst00000670416 | sg00000286589 | ac005697.3-201 | 17 | 27930177 | 27930920 | + | lnc_RNA | lncrna |
| 457274 | enst00000583307 | sg00000173065 | fam222b-212 | 17 | 28759241 | 28842727 | - | mRNA | protein_coding |
| 457330 | enst00000581229 | sg00000173065 | fam222b-207 | 17 | 28759551 | 28842783 | - | mRNA | protein_coding |
| 457331 | enst00000582266 | sg00000173065 | fam222b-211 | 17 | 28757377 | 28842784 | - | mRNA | protein_coding |
| 457337 | enst00000577682 | sg00000173065 | fam222b-205 | 17 | 28759481 | 28842790 | - | mRNA | protein_coding |
| 457337 | enst00000577376 | sg00000173065 | fam222b-203 | 17 | 28759422 | 28842790 | - | mRNA | protein_coding |
| 457339 | enst00000581381 | sg00000173065 | fam222b-208 | 17 | 28759592 | 28842792 | - | mRNA | protein_coding |
| 457370 | enst00000581407 | sg00000173065 | fam222b-209 | 17 | 28755980 | 28842823 | - | mRNA | protein_coding |
| 457370 | enst00000579381 | sg00000173065 | fam222b-206 | 17 | 28759850 | 28842823 | - | mRNA | nonsense_mediated_decay |
| 457386 | enst00000583522 | sg00000173065 | fam222b-213 | 17 | 28759571 | 28842839 | - | mRNA | protein_coding |
| 463407 | enst00000582737 | sg00000264138 | ac024267.3-201 | 17 | 28848860 | 28849592 | + | pseudogenic_transcript | unprocessed_pseudogene |
| 469537 | enst00000583953 | sg00000173065 | fam222b-214 | 17 | 28759398 | 28854990 | - | mRNA | protein_coding |
| 469557 | enst00000412138 | sg00000132591 | eral1-202 | 17 | 28855010 | 28858775 | + | mRNA | nonsense_mediated_decay |
| 469563 | enst00000254928 | sg00000132591 | eral1-201 | 17 | 28855016 | 28861061 | + | mRNA | protein_coding |
| 469576 | enst00000578001 | sg00000132591 | eral1-206 | 17 | 28855029 | 28858395 | + | lnc_RNA | processed_transcript |
| 469583 | enst00000461894 | sg00000132591 | eral1-203 | 17 | 28855036 | 28861059 | + | mRNA | nonsense_mediated_decay |
| 469593 | enst00000580917 | sg00000132591 | eral1-207 | 17 | 28855046 | 28859113 | + | mRNA | protein_coding |
| 469779 | enst00000577513 | sg00000173065 | fam222b-204 | 17 | 28759551 | 28855232 | - | mRNA | protein_coding |
| 472569 | enst00000577942 | sg00000132591 | eral1-205 | 17 | 28858022 | 28859113 | + | lnc_RNA | retained_intron |
| 472585 | enst00000471992 | sg00000132591 | eral1-204 | 17 | 28858038 | 28861009 | + | lnc_RNA | retained_intron |
| 473532 | enst00000583487 | sg00000132591 | eral1-208 | 17 | 28858985 | 28861061 | + | mRNA | protein_coding |
| 475918 | enst00000636285 | sg00000283364 | mir451b-201 | 17 | 28861371 | 28861438 | + | miRNA | mirna |
| 475987 | enst00000385059 | sg00000284565 | mir451a-201 | 17 | 28861369 | 28861440 | - | miRNA | mirna |
| 476165 | enst00000384886 | sg00000283819 | mir144-201 | 17 | 28861533 | 28861618 | - | miRNA | mirna |
| 476277 | enst00000581873 | sg00000284085 | mir4732-201 | 17 | 28861655 | 28861730 | - | miRNA | mirna |
| 476513 | enst00000582320 | sg00000264066 | ac024267.2-201 | 17 | 28861072 | 28861966 | - | lnc_RNA | lncrna |
| -489522 | enst00000582343 | sg00000232859 | lyrm9-207 | 17 | 27891929 | 27894752 | - | lnc_RNA | retained_intron |
| -490891 | enst00000379102 | sg00000232859 | lyrm9-201 | 17 | 27879294 | 27893383 | - | mRNA | protein_coding |
| -490891 | enst00000508862 | sg00000232859 | lyrm9-206 | 17 | 27879051 | 27893383 | - | mRNA | protein_coding |
| -490909 | enst00000582441 | sg00000266202 | ac005697.1-201 | 17 | 27798806 | 27893365 | - | mRNA | protein_coding |
| -490915 | enst00000460380 | sg00000232859 | lyrm9-203 | 17 | 27878358 | 27893359 | - | mRNA | protein_coding |
| -491763 | enst00000503642 | sg00000232859 | lyrm9-204 | 17 | 27880191 | 27892511 | - | mRNA | protein_coding |
| -491953 | enst00000379103 | sg00000232859 | lyrm9-202 | 17 | 27878314 | 27892321 | - | mRNA | protein_coding |
| 497206 | enst00000584569 | sg00000132589 | flot2-209 | 17 | 28879341 | 28882659 | - | lnc_RNA | processed_transcript |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc