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CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #35 | 9 | 127754034 | 127755653 | 1619 | 3 | 54 | 4.61803e-24 | 1.31218e-21 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| 0 | enst00000629203 | sg00000095370 | sh2d3c-213 | 9 | 127738486 | 127755274 | - | mRNA | protein_coding |
| 0 | enst00000420366 | sg00000095370 | sh2d3c-205 | 9 | 127738318 | 127755304 | - | mRNA | protein_coding |
| 0 | enst00000414380 | sg00000095370 | sh2d3c-204 | 9 | 127749212 | 127755030 | - | mRNA | protein_coding |
| 0 | enst00000652130 | sg00000286196 | al162586.2-201 | 9 | 127754534 | 127760560 | + | lnc_RNA | lncrna |
| 6535 | enst00000464239 | sg00000095370 | sh2d3c-208 | 9 | 127745018 | 127762188 | - | lnc_RNA | processed_transcript |
| 6634 | enst00000488685 | sg00000095370 | sh2d3c-212 | 9 | 127747147 | 127762287 | - | lnc_RNA | processed_transcript |
| 6763 | enst00000440630 | sg00000095370 | sh2d3c-207 | 9 | 127744898 | 127762416 | - | mRNA | protein_coding |
| 6765 | enst00000429553 | sg00000095370 | sh2d3c-206 | 9 | 127738318 | 127762418 | - | mRNA | protein_coding |
| -9314 | enst00000484160 | sg00000095370 | sh2d3c-211 | 9 | 127742659 | 127744720 | - | lnc_RNA | processed_transcript |
| 15716 | enst00000373276 | sg00000095370 | sh2d3c-202 | 9 | 127738318 | 127771369 | - | mRNA | protein_coding |
| 15785 | enst00000373277 | sg00000095370 | sh2d3c-203 | 9 | 127738317 | 127771438 | - | mRNA | protein_coding |
| 18491 | enst00000471939 | sg00000095370 | sh2d3c-210 | 9 | 127742849 | 127774144 | - | lnc_RNA | processed_transcript |
| -18721 | enst00000496460 | sg00000160404 | tor2a-209 | 9 | 127731844 | 127735313 | - | mRNA | nonsense_mediated_decay |
| -18727 | enst00000472723 | sg00000160404 | tor2a-206 | 9 | 127731527 | 127735307 | - | lnc_RNA | retained_intron |
| -18740 | enst00000373281 | sg00000160404 | tor2a-202 | 9 | 127731525 | 127735294 | - | mRNA | protein_coding |
| -18740 | enst00000463577 | sg00000160404 | tor2a-205 | 9 | 127731525 | 127735294 | - | mRNA | protein_coding |
| -18740 | enst00000373284 | sg00000160404 | tor2a-203 | 9 | 127731524 | 127735294 | - | mRNA | protein_coding |
| -18742 | enst00000336067 | sg00000160404 | tor2a-201 | 9 | 127731524 | 127735292 | - | mRNA | protein_coding |
| -18759 | enst00000493439 | sg00000160404 | tor2a-207 | 9 | 127732169 | 127735275 | - | mRNA | nonsense_mediated_decay |
| -18759 | enst00000463256 | sg00000160404 | tor2a-204 | 9 | 127731780 | 127735275 | - | mRNA | nonsense_mediated_decay |
| -21160 | enst00000494135 | sg00000160404 | tor2a-208 | 9 | 127731912 | 127732874 | - | lnc_RNA | retained_intron |
| 23013 | enst00000314830 | sg00000095370 | sh2d3c-201 | 9 | 127738317 | 127778666 | - | mRNA | protein_coding |
| 23057 | enst00000468969 | sg00000095370 | sh2d3c-209 | 9 | 127741845 | 127778710 | - | lnc_RNA | processed_transcript |
| -29161 | enst00000419060 | sg00000187024 | ptrh1-204 | 9 | 127713510 | 127724873 | - | mRNA | protein_coding |
| -29202 | enst00000429848 | sg00000187024 | ptrh1-206 | 9 | 127715980 | 127724832 | - | lnc_RNA | processed_transcript |
| 30026 | enst00000421939 | sg00000136807 | cdk9-202 | 9 | 127785679 | 127787575 | + | mRNA | protein_coding |
| 30180 | enst00000583311 | sg00000283863 | mir3960-201 | 9 | 127785833 | 127785923 | + | miRNA | mirna |
| 30265 | enst00000636310 | sg00000284547 | mir2861-201 | 9 | 127785918 | 127786007 | + | miRNA | mirna |
| 30381 | enst00000373264 | sg00000136807 | cdk9-201 | 9 | 127786034 | 127790792 | + | mRNA | protein_coding |
| 30421 | enst00000480353 | sg00000136807 | cdk9-203 | 9 | 127786074 | 127788412 | + | lnc_RNA | processed_transcript |
| 31847 | enst00000491521 | sg00000136807 | cdk9-204 | 9 | 127787500 | 127788605 | + | lnc_RNA | processed_transcript |
| 32769 | enst00000498339 | sg00000136807 | cdk9-205 | 9 | 127788422 | 127789364 | + | lnc_RNA | processed_transcript |
| -33745 | enst00000488285 | sg00000167094 | ttc16-202 | 9 | 127720289 | 127731589 | + | lnc_RNA | retained_intron |
| -33755 | enst00000489226 | sg00000167094 | ttc16-203 | 9 | 127720279 | 127731522 | + | lnc_RNA | retained_intron |
| -37955 | enst00000373289 | sg00000167094 | ttc16-201 | 9 | 127716079 | 127731590 | + | mRNA | protein_coding |
| -38031 | enst00000423807 | sg00000187024 | ptrh1-205 | 9 | 127713493 | 127716003 | - | mRNA | protein_coding |
| -38371 | enst00000543175 | sg00000187024 | ptrh1-208 | 9 | 127713807 | 127715663 | - | mRNA | protein_coding |
| -38383 | enst00000416214 | sg00000187024 | ptrh1-203 | 9 | 127714628 | 127715651 | - | mRNA | protein_coding |
| -38387 | enst00000335223 | sg00000187024 | ptrh1-201 | 9 | 127692978 | 127715647 | - | mRNA | protein_coding |
| -38403 | enst00000414832 | sg00000187024 | ptrh1-202 | 9 | 127714068 | 127715631 | - | mRNA | protein_coding |
| -38430 | enst00000456267 | sg00000187024 | ptrh1-207 | 9 | 127713972 | 127715604 | - | mRNA | protein_coding |
| 38944 | enst00000479147 | sg00000136877 | fpgs-213 | 9 | 127794597 | 127807682 | + | lnc_RNA | processed_transcript |
| 39029 | enst00000479375 | sg00000136877 | fpgs-214 | 9 | 127794682 | 127808301 | + | lnc_RNA | processed_transcript |
| -41296 | enst00000461104 | sg00000160401 | cfap157-203 | 9 | 127712738 | 127715337 | + | mRNA | protein_coding |
| -41697 | enst00000464092 | sg00000160401 | cfap157-204 | 9 | 127712337 | 127716002 | + | lnc_RNA | retained_intron |
| -42144 | enst00000373293 | sg00000160401 | cfap157-201 | 9 | 127711890 | 127715896 | + | lnc_RNA | retained_intron |
| -47015 | enst00000614677 | sg00000160401 | cfap157-206 | 9 | 127707019 | 127714021 | + | mRNA | protein_coding |
| -47045 | enst00000496009 | sg00000160401 | cfap157-205 | 9 | 127706989 | 127714021 | + | lnc_RNA | retained_intron |
| -47046 | enst00000373295 | sg00000160401 | cfap157-202 | 9 | 127706988 | 127716002 | + | mRNA | protein_coding |
| 47205 | enst00000393706 | sg00000136877 | fpgs-204 | 9 | 127802858 | 127814081 | + | mRNA | protein_coding |
| 47205 | enst00000630236 | sg00000136877 | fpgs-221 | 9 | 127802858 | 127814081 | + | mRNA | protein_coding |
| 47229 | enst00000373247 | sg00000136877 | fpgs-203 | 9 | 127802882 | 127814081 | + | mRNA | protein_coding |
| 47240 | enst00000488307 | sg00000136877 | fpgs-216 | 9 | 127802893 | 127808882 | + | lnc_RNA | processed_transcript |
| 47258 | enst00000373228 | sg00000136877 | fpgs-202 | 9 | 127802911 | 127813424 | + | mRNA | protein_coding |
| 47264 | enst00000481552 | sg00000136877 | fpgs-215 | 9 | 127802917 | 127807688 | + | lnc_RNA | processed_transcript |
| 47265 | enst00000460181 | sg00000136877 | fpgs-207 | 9 | 127802918 | 127814058 | + | lnc_RNA | processed_transcript |
| 47279 | enst00000475765 | sg00000136877 | fpgs-212 | 9 | 127802932 | 127807849 | + | lnc_RNA | processed_transcript |
| 47371 | enst00000496586 | sg00000136877 | fpgs-219 | 9 | 127803024 | 127807279 | + | lnc_RNA | processed_transcript |
| 47555 | enst00000373225 | sg00000136877 | fpgs-201 | 9 | 127803208 | 127814059 | + | mRNA | protein_coding |
| 47599 | enst00000431857 | sg00000136877 | fpgs-206 | 9 | 127803252 | 127809715 | + | mRNA | protein_coding |
| 47671 | enst00000423577 | sg00000136877 | fpgs-205 | 9 | 127803324 | 127808301 | + | mRNA | protein_coding |
| 48633 | enst00000469310 | sg00000136877 | fpgs-209 | 9 | 127804286 | 127804857 | + | lnc_RNA | processed_transcript |
| 50844 | enst00000497386 | sg00000136877 | fpgs-220 | 9 | 127806497 | 127808705 | + | lnc_RNA | processed_transcript |
| 52020 | enst00000488506 | sg00000136877 | fpgs-217 | 9 | 127807673 | 127813284 | + | lnc_RNA | processed_transcript |
| 52494 | enst00000489522 | sg00000136877 | fpgs-218 | 9 | 127808147 | 127810037 | + | lnc_RNA | processed_transcript |
| 52611 | enst00000467826 | sg00000136877 | fpgs-208 | 9 | 127808264 | 127814327 | + | lnc_RNA | processed_transcript |
| 53069 | enst00000473536 | sg00000136877 | fpgs-210 | 9 | 127808722 | 127810058 | + | lnc_RNA | processed_transcript |
| 54341 | enst00000475270 | sg00000136877 | fpgs-211 | 9 | 127809994 | 127813574 | + | lnc_RNA | processed_transcript |
| -59075 | enst00000641641 | sg00000187024 | ptrh1-209 | 9 | 127690348 | 127694959 | - | mRNA | protein_coding |
| 60413 | enst00000439298 | sg00000225032 | al162586.1-201 | 9 | 127816066 | 127822520 | + | lnc_RNA | lncrna |
| 62466 | enst00000425991 | sg00000225032 | al162586.1-202 | 9 | 127818119 | 127821431 | + | lnc_RNA | lncrna |
| -63194 | enst00000624141 | sg00000279571 | al162426.1-201 | 9 | 127690098 | 127690840 | - | lnc_RNA | lncrna |
| -63239 | enst00000577791 | sg00000283874 | mir3911-201 | 9 | 127690687 | 127690795 | - | miRNA | mirna |
| -63900 | enst00000628768 | sg00000136854 | stxbp1-212 | 9 | 127690134 | 127692715 | + | lnc_RNA | processed_transcript |
| 68752 | enst00000486329 | sg00000106991 | eng-205 | 9 | 127819238 | 127824405 | - | lnc_RNA | processed_transcript |
| 74151 | enst00000462196 | sg00000106991 | eng-203 | 9 | 127825789 | 127829804 | - | lnc_RNA | processed_transcript |
| -74249 | enst00000628638 | sg00000136854 | stxbp1-211 | 9 | 127679785 | 127691061 | + | lnc_RNA | processed_transcript |
| -75510 | enst00000494254 | sg00000136854 | stxbp1-204 | 9 | 127678524 | 127684680 | + | mRNA | protein_coding |
| 77090 | enst00000410489 | sg00000222421 | al157935.1-201 | 9 | 127832635 | 127832743 | - | ncRNA | misc_rna |
| 85569 | enst00000410523 | sg00000222455 | rna5sp296-201 | 9 | 127841112 | 127841222 | - | pseudogenic_transcript | rrna_pseudogene |
| 91514 | enst00000480266 | sg00000106991 | eng-204 | 9 | 127815013 | 127847167 | - | mRNA | protein_coding |
| -92575 | enst00000626416 | sg00000136854 | stxbp1-208 | 9 | 127661459 | 127692936 | + | lnc_RNA | processed_transcript |
| -92901 | enst00000496504 | sg00000136854 | stxbp1-205 | 9 | 127661133 | 127663722 | + | mRNA | protein_coding |
| 98983 | enst00000344849 | sg00000106991 | eng-201 | 9 | 127815017 | 127854636 | - | mRNA | protein_coding |
| 99103 | enst00000373203 | sg00000106991 | eng-202 | 9 | 127815012 | 127854756 | - | mRNA | protein_coding |
| -102410 | enst00000647107 | sg00000136854 | stxbp1-222 | 9 | 127651624 | 127684513 | + | mRNA | protein_coding |
| -111691 | enst00000626333 | sg00000136854 | stxbp1-207 | 9 | 127642343 | 127663258 | + | mRNA | protein_coding |
| 113842 | enst00000583126 | sg00000263979 | mir4672-201 | 9 | 127869415 | 127869495 | - | miRNA | mirna |
| 117060 | enst00000550143 | sg00000106992 | ak1-204 | 9 | 127867841 | 127872713 | - | mRNA | nonsense_mediated_decay |
| 117401 | enst00000413016 | sg00000106992 | ak1-203 | 9 | 127867890 | 127873054 | - | lnc_RNA | processed_transcript |
| 117891 | enst00000223836 | sg00000106992 | ak1-201 | 9 | 127868001 | 127873544 | - | mRNA | protein_coding |
| 119354 | enst00000373156 | sg00000106992 | ak1-202 | 9 | 127867999 | 127875007 | - | mRNA | protein_coding |
| 122018 | enst00000550992 | sg00000106992 | ak1-205 | 9 | 127868463 | 127877671 | - | mRNA | nonsense_mediated_decay |
| 122022 | enst00000644144 | sg00000106992 | ak1-206 | 9 | 127866486 | 127877675 | - | mRNA | protein_coding |
| 129779 | enst00000548587 | sg00000257524 | al157935.3-206 | 9 | 127872712 | 127885432 | - | lnc_RNA | processed_transcript |
| 129889 | enst00000476274 | sg00000257524 | al157935.3-204 | 9 | 127867929 | 127885542 | - | lnc_RNA | processed_transcript |
| 129936 | enst00000642314 | sg00000257524 | al157935.3-207 | 9 | 127872826 | 127885589 | - | lnc_RNA | processed_transcript |
| -141673 | enst00000476182 | sg00000136854 | stxbp1-203 | 9 | 127612361 | 127613751 | + | mRNA | protein_coding |
| -141674 | enst00000650920 | sg00000136854 | stxbp1-223 | 9 | 127612360 | 127692747 | + | mRNA | protein_coding |
| -141751 | enst00000373299 | sg00000136854 | stxbp1-201 | 9 | 127612283 | 127692716 | + | mRNA | protein_coding |
| 141755 | enst00000373141 | sg00000160408 | st6galnac6-202 | 9 | 127885322 | 127897408 | - | mRNA | protein_coding |
| 141755 | enst00000542456 | sg00000160408 | st6galnac6-215 | 9 | 127885321 | 127897408 | - | mRNA | protein_coding |
| -141757 | enst00000627871 | sg00000136854 | stxbp1-210 | 9 | 127612277 | 127661189 | + | mRNA | protein_coding |
| -141757 | enst00000630492 | sg00000136854 | stxbp1-213 | 9 | 127612277 | 127661126 | + | mRNA | protein_coding |
| -141769 | enst00000637173 | sg00000136854 | stxbp1-218 | 9 | 127612265 | 127692936 | + | mRNA | protein_coding |
| -141769 | enst00000637060 | sg00000136854 | stxbp1-217 | 9 | 127612265 | 127692735 | + | mRNA | nonsense_mediated_decay |
| -141786 | enst00000637464 | sg00000136854 | stxbp1-219 | 9 | 127612248 | 127692735 | + | mRNA | nonsense_mediated_decay |
| -141812 | enst00000635950 | sg00000136854 | stxbp1-214 | 9 | 127612222 | 127696027 | + | mRNA | nonsense_mediated_decay |
| -141812 | enst00000637953 | sg00000136854 | stxbp1-221 | 9 | 127612222 | 127692735 | + | mRNA | protein_coding |
| -141812 | enst00000636962 | sg00000136854 | stxbp1-216 | 9 | 127612222 | 127696027 | + | mRNA | protein_coding |
| -141827 | enst00000373302 | sg00000136854 | stxbp1-202 | 9 | 127612207 | 127692716 | + | mRNA | protein_coding |
| -142200 | enst00000626539 | sg00000136854 | stxbp1-209 | 9 | 127611834 | 127692735 | + | mRNA | protein_coding |
| -142229 | enst00000636509 | sg00000136854 | stxbp1-215 | 9 | 127611805 | 127692680 | + | mRNA | nonsense_mediated_decay |
| -142274 | enst00000625363 | sg00000136854 | stxbp1-206 | 9 | 127611760 | 127663265 | + | mRNA | protein_coding |
| 142328 | enst00000291839 | sg00000160408 | st6galnac6-201 | 9 | 127885321 | 127897981 | - | mRNA | protein_coding |
| 143763 | enst00000481355 | sg00000160408 | st6galnac6-210 | 9 | 127894522 | 127899416 | - | lnc_RNA | processed_transcript |
| 143882 | enst00000478319 | sg00000160408 | st6galnac6-208 | 9 | 127894549 | 127899535 | - | lnc_RNA | processed_transcript |
| 143921 | enst00000485320 | sg00000160408 | st6galnac6-212 | 9 | 127885326 | 127899574 | - | lnc_RNA | processed_transcript |
| 143928 | enst00000645007 | sg00000257524 | al157935.3-205 | 9 | 127868047 | 127899581 | - | mRNA | nonsense_mediated_decay |
| 143938 | enst00000646171 | sg00000257524 | al157935.3-203 | 9 | 127867864 | 127899591 | - | mRNA | nonsense_mediated_decay |
| 143940 | enst00000463086 | sg00000160408 | st6galnac6-207 | 9 | 127886754 | 127899593 | - | lnc_RNA | processed_transcript |
| 143951 | enst00000494541 | sg00000160408 | st6galnac6-213 | 9 | 127890698 | 127899604 | - | lnc_RNA | processed_transcript |
| 143953 | enst00000480417 | sg00000160408 | st6galnac6-209 | 9 | 127887535 | 127899606 | - | lnc_RNA | processed_transcript |
| 143993 | enst00000373142 | sg00000160408 | st6galnac6-203 | 9 | 127885322 | 127899646 | - | mRNA | protein_coding |
| 144000 | enst00000373146 | sg00000160408 | st6galnac6-205 | 9 | 127885321 | 127899653 | - | mRNA | protein_coding |
| 144002 | enst00000373144 | sg00000160408 | st6galnac6-204 | 9 | 127885322 | 127899655 | - | mRNA | protein_coding |
| 149671 | enst00000483353 | sg00000160408 | st6galnac6-211 | 9 | 127903015 | 127905324 | - | lnc_RNA | retained_intron |
| 149677 | enst00000447681 | sg00000160408 | st6galnac6-206 | 9 | 127890637 | 127905330 | - | mRNA | protein_coding |
| 149695 | enst00000622357 | sg00000160408 | st6galnac6-216 | 9 | 127885321 | 127905348 | - | mRNA | protein_coding |
| 149755 | enst00000494611 | sg00000160408 | st6galnac6-214 | 9 | 127896246 | 127905408 | - | lnc_RNA | processed_transcript |
| 150322 | enst00000643338 | sg00000257524 | al157935.3-202 | 9 | 127867852 | 127905975 | - | mRNA | nonsense_mediated_decay |
| 150369 | enst00000643029 | sg00000257524 | al157935.3-201 | 9 | 127867850 | 127906022 | - | mRNA | nonsense_mediated_decay |
| 156741 | enst00000474282 | sg00000136840 | st6galnac4-204 | 9 | 127908325 | 127912394 | - | lnc_RNA | processed_transcript |
| 159109 | enst00000495983 | sg00000136840 | st6galnac4-207 | 9 | 127908318 | 127914762 | - | lnc_RNA | processed_transcript |
| 159213 | enst00000483438 | sg00000136840 | st6galnac4-206 | 9 | 127912387 | 127914866 | - | lnc_RNA | processed_transcript |
| 161343 | enst00000361444 | sg00000136840 | st6galnac4-202 | 9 | 127908447 | 127916996 | - | mRNA | protein_coding |
| 161365 | enst00000467674 | sg00000136840 | st6galnac4-203 | 9 | 127908344 | 127917018 | - | lnc_RNA | processed_transcript |
| 161385 | enst00000479747 | sg00000136840 | st6galnac4-205 | 9 | 127915976 | 127917038 | - | lnc_RNA | processed_transcript |
| 161388 | enst00000335791 | sg00000136840 | st6galnac4-201 | 9 | 127907886 | 127917041 | - | mRNA | protein_coding |
| 166081 | enst00000477191 | sg00000167103 | pip5kl1-206 | 9 | 127920881 | 127921734 | - | lnc_RNA | processed_transcript |
| 166258 | enst00000485562 | sg00000167103 | pip5kl1-207 | 9 | 127920881 | 127921911 | - | lnc_RNA | processed_transcript |
| 171533 | enst00000495448 | sg00000167103 | pip5kl1-210 | 9 | 127921790 | 127927186 | - | lnc_RNA | processed_transcript |
| 171731 | enst00000464759 | sg00000167103 | pip5kl1-204 | 9 | 127921776 | 127927384 | - | lnc_RNA | processed_transcript |
| 171804 | enst00000497234 | sg00000167103 | pip5kl1-211 | 9 | 127925204 | 127927457 | - | lnc_RNA | processed_transcript |
| 171838 | enst00000300432 | sg00000167103 | pip5kl1-201 | 9 | 127921529 | 127927491 | - | mRNA | protein_coding |
| 172474 | enst00000476624 | sg00000167103 | pip5kl1-205 | 9 | 127925496 | 127928127 | - | lnc_RNA | processed_transcript |
| 173103 | enst00000464108 | sg00000167103 | pip5kl1-203 | 9 | 127925135 | 127928756 | - | lnc_RNA | processed_transcript |
| 173117 | enst00000498783 | sg00000167103 | pip5kl1-212 | 9 | 127925135 | 127928770 | - | lnc_RNA | processed_transcript |
| 173138 | enst00000490773 | sg00000167103 | pip5kl1-208 | 9 | 127925136 | 127928791 | - | lnc_RNA | processed_transcript |
| -174664 | enst00000637521 | sg00000136854 | stxbp1-220 | 9 | 127579370 | 127690886 | + | mRNA | protein_coding |
| -175045 | enst00000373314 | sg00000136830 | niban2-202 | 9 | 127505339 | 127578989 | - | mRNA | protein_coding |
| 175124 | enst00000388747 | sg00000167103 | pip5kl1-202 | 9 | 127920881 | 127930777 | - | mRNA | protein_coding |
| 175132 | enst00000492296 | sg00000167103 | pip5kl1-209 | 9 | 127927777 | 127930785 | - | lnc_RNA | processed_transcript |
| 178850 | enst00000592240 | sg00000227218 | al157935.2-201 | 9 | 127934503 | 127940855 | + | lnc_RNA | lncrna |
| 182126 | enst00000473360 | sg00000136908 | dpm2-204 | 9 | 127935383 | 127937779 | - | lnc_RNA | retained_intron |
| 182165 | enst00000470181 | sg00000136908 | dpm2-203 | 9 | 127935341 | 127937818 | - | lnc_RNA | retained_intron |
| 182173 | enst00000495270 | sg00000136908 | dpm2-205 | 9 | 127935099 | 127937826 | - | lnc_RNA | retained_intron |
| 182190 | enst00000373110 | sg00000136908 | dpm2-202 | 9 | 127936034 | 127937843 | - | mRNA | protein_coding |
| 182230 | enst00000588890 | sg00000227218 | al157935.2-202 | 9 | 127937883 | 127940843 | + | lnc_RNA | lncrna |
| 182230 | enst00000587978 | sg00000227218 | al157935.2-203 | 9 | 127937883 | 127940851 | + | lnc_RNA | lncrna |
| 182260 | enst00000586374 | sg00000227218 | al157935.2-204 | 9 | 127937913 | 127940855 | + | lnc_RNA | lncrna |
| 182266 | enst00000590283 | sg00000227218 | al157935.2-205 | 9 | 127937919 | 127940855 | + | lnc_RNA | lncrna |
| 182269 | enst00000587355 | sg00000227218 | al157935.2-206 | 9 | 127937922 | 127940855 | + | lnc_RNA | lncrna |
| 182478 | enst00000591408 | sg00000227218 | al157935.2-207 | 9 | 127938131 | 127940822 | + | lnc_RNA | lncrna |
| 182831 | enst00000314392 | sg00000136908 | dpm2-201 | 9 | 127935099 | 127938484 | - | mRNA | protein_coding |
| 183097 | enst00000608805 | sg00000227218 | al157935.2-208 | 9 | 127938750 | 127940792 | + | lnc_RNA | lncrna |
| 184083 | enst00000415141 | sg00000227218 | al157935.2-209 | 9 | 127939736 | 127940952 | + | lnc_RNA | lncrna |
| -184958 | enst00000484348 | sg00000136830 | niban2-207 | 9 | 127507184 | 127569076 | - | lnc_RNA | processed_transcript |
| -184961 | enst00000373312 | sg00000136830 | niban2-201 | 9 | 127505343 | 127569073 | - | mRNA | protein_coding |
| -185081 | enst00000468379 | sg00000136830 | niban2-204 | 9 | 127507172 | 127568953 | - | lnc_RNA | processed_transcript |
| -185149 | enst00000478917 | sg00000136830 | niban2-206 | 9 | 127505343 | 127568885 | - | lnc_RNA | processed_transcript |
| 192506 | enst00000465821 | sg00000167106 | fam102a-204 | 9 | 127940881 | 127948159 | - | lnc_RNA | retained_intron |
| 195069 | enst00000373084 | sg00000167106 | fam102a-202 | 9 | 127940881 | 127950722 | - | mRNA | protein_coding |
| 195069 | enst00000300434 | sg00000167106 | fam102a-201 | 9 | 127940883 | 127950722 | - | lnc_RNA | processed_transcript |
| 208092 | enst00000479828 | sg00000167106 | fam102a-205 | 9 | 127948199 | 127963745 | - | lnc_RNA | processed_transcript |
| 224425 | enst00000493175 | sg00000167106 | fam102a-206 | 9 | 127953269 | 127980078 | - | lnc_RNA | processed_transcript |
| 224808 | enst00000494606 | sg00000167106 | fam102a-207 | 9 | 127972582 | 127980461 | - | lnc_RNA | processed_transcript |
| 225336 | enst00000373095 | sg00000167106 | fam102a-203 | 9 | 127940582 | 127980989 | - | mRNA | protein_coding |
| -226813 | enst00000476091 | sg00000136830 | niban2-205 | 9 | 127524806 | 127527221 | - | lnc_RNA | processed_transcript |
| -237141 | enst00000465154 | sg00000136830 | niban2-203 | 9 | 127509888 | 127516893 | - | lnc_RNA | processed_transcript |
| -274085 | enst00000472068 | sg00000148356 | lrsam1-205 | 9 | 127479949 | 127501054 | + | lnc_RNA | processed_transcript |
| -274648 | enst00000483302 | sg00000148356 | lrsam1-206 | 9 | 127479386 | 127503499 | + | lnc_RNA | processed_transcript |
| -280105 | enst00000498513 | sg00000148356 | lrsam1-209 | 9 | 127473929 | 127487560 | + | lnc_RNA | processed_transcript |
| -283159 | enst00000363918 | sg00000200788 | al445222.1-201 | 9 | 127470875 | 127470987 | + | ncRNA | misc_rna |
| 301709 | enst00000414976 | sg00000230848 | al360268.2-201 | 9 | 128039135 | 128057362 | - | lnc_RNA | lncrna |
| -301779 | enst00000373322 | sg00000148356 | lrsam1-203 | 9 | 127452255 | 127503499 | + | mRNA | protein_coding |
| -302103 | enst00000485704 | sg00000148356 | lrsam1-207 | 9 | 127451931 | 127457413 | + | lnc_RNA | processed_transcript |
| -302501 | enst00000486587 | sg00000148356 | lrsam1-208 | 9 | 127451533 | 127454012 | + | lnc_RNA | processed_transcript |
| -302521 | enst00000323301 | sg00000148356 | lrsam1-202 | 9 | 127451513 | 127503499 | + | mRNA | protein_coding |
| -302529 | enst00000373324 | sg00000148356 | lrsam1-204 | 9 | 127451505 | 127503499 | + | mRNA | protein_coding |
| -302548 | enst00000300417 | sg00000148356 | lrsam1-201 | 9 | 127451486 | 127503501 | + | mRNA | protein_coding |
| -302628 | enst00000361436 | sg00000197958 | rpl12-201 | 9 | 127447674 | 127451406 | - | mRNA | protein_coding |
| -302629 | enst00000497825 | sg00000197958 | rpl12-204 | 9 | 127447674 | 127451405 | - | lnc_RNA | processed_transcript |
| -302629 | enst00000497322 | sg00000197958 | rpl12-203 | 9 | 127447680 | 127451405 | - | lnc_RNA | processed_transcript |
| -302661 | enst00000536368 | sg00000197958 | rpl12-205 | 9 | 127447677 | 127451373 | - | mRNA | protein_coding |
| -304334 | enst00000483598 | sg00000197958 | rpl12-202 | 9 | 127449110 | 127449700 | - | lnc_RNA | processed_transcript |
| -305404 | enst00000364432 | sg00000201302 | snora65-201 | 9 | 127448501 | 127448630 | - | snoRNA | snorna |
| 308089 | enst00000470245 | sg00000171169 | naif1-203 | 9 | 128061233 | 128063742 | - | lnc_RNA | processed_transcript |
| 310631 | enst00000488519 | sg00000171169 | naif1-204 | 9 | 128061990 | 128066284 | - | lnc_RNA | processed_transcript |
| 311667 | enst00000373078 | sg00000171169 | naif1-201 | 9 | 128061233 | 128067320 | - | mRNA | protein_coding |
| 312548 | enst00000373068 | sg00000148339 | slc25a25-203 | 9 | 128068201 | 128109244 | + | mRNA | protein_coding |
| 312553 | enst00000466139 | sg00000171169 | naif1-202 | 9 | 128063642 | 128068206 | - | lnc_RNA | processed_transcript |
| 312640 | enst00000373069 | sg00000148339 | slc25a25-204 | 9 | 128068293 | 128109245 | + | mRNA | protein_coding |
| -329652 | enst00000342483 | sg00000196152 | znf79-201 | 9 | 127424382 | 127445372 | + | mRNA | protein_coding |
| -329660 | enst00000617266 | sg00000196152 | znf79-204 | 9 | 127424374 | 127445371 | + | mRNA | protein_coding |
| -329660 | enst00000612342 | sg00000196152 | znf79-203 | 9 | 127424374 | 127445371 | + | mRNA | protein_coding |
| -329660 | enst00000543471 | sg00000196152 | znf79-202 | 9 | 127424374 | 127445371 | + | mRNA | protein_coding |
| 335811 | enst00000373066 | sg00000148339 | slc25a25-202 | 9 | 128091464 | 128109245 | + | mRNA | protein_coding |
| 335811 | enst00000432073 | sg00000148339 | slc25a25-205 | 9 | 128091464 | 128109245 | + | mRNA | protein_coding |
| 338804 | enst00000453870 | sg00000230536 | al360268.1-201 | 9 | 128090969 | 128094457 | - | lnc_RNA | lncrna |
| 342651 | enst00000373064 | sg00000148339 | slc25a25-201 | 9 | 128098304 | 128109245 | + | mRNA | protein_coding |
| 342884 | enst00000472769 | sg00000148339 | slc25a25-208 | 9 | 128098537 | 128103729 | + | mRNA | nonsense_mediated_decay |
| 345214 | enst00000445012 | sg00000148339 | slc25a25-206 | 9 | 128100867 | 128103837 | + | lnc_RNA | retained_intron |
| -346630 | enst00000484208 | sg00000136856 | slc2a8-211 | 9 | 127407404 | 127408424 | + | lnc_RNA | processed_transcript |
| 348069 | enst00000466983 | sg00000148339 | slc25a25-207 | 9 | 128103722 | 128107647 | + | mRNA | protein_coding |
| -349985 | enst00000485806 | sg00000136856 | slc2a8-213 | 9 | 127404049 | 127405447 | + | lnc_RNA | processed_transcript |
| -350011 | enst00000477027 | sg00000136856 | slc2a8-210 | 9 | 127404023 | 127408419 | + | lnc_RNA | processed_transcript |
| -350756 | enst00000489239 | sg00000136856 | slc2a8-214 | 9 | 127403278 | 127405469 | + | lnc_RNA | processed_transcript |
| -351670 | enst00000484617 | sg00000136856 | slc2a8-212 | 9 | 127402364 | 127403747 | + | lnc_RNA | processed_transcript |
| -354070 | enst00000430147 | sg00000136856 | slc2a8-207 | 9 | 127399964 | 127407652 | + | mRNA | protein_coding |
| -355851 | enst00000423934 | sg00000136856 | slc2a8-206 | 9 | 127398183 | 127405476 | + | mRNA | protein_coding |
| -355851 | enst00000439597 | sg00000136856 | slc2a8-208 | 9 | 127398183 | 127405475 | + | mRNA | protein_coding |
| -356650 | enst00000419132 | sg00000136856 | slc2a8-204 | 9 | 127397384 | 127403791 | + | mRNA | protein_coding |
| -356803 | enst00000373360 | sg00000136856 | slc2a8-202 | 9 | 127397231 | 127407898 | + | mRNA | protein_coding |
| -356808 | enst00000373352 | sg00000136856 | slc2a8-201 | 9 | 127397226 | 127407291 | + | mRNA | protein_coding |
| -356827 | enst00000419917 | sg00000136856 | slc2a8-205 | 9 | 127397207 | 127404067 | + | mRNA | protein_coding |
| -356865 | enst00000373371 | sg00000136856 | slc2a8-203 | 9 | 127397169 | 127407898 | + | mRNA | protein_coding |
| -356879 | enst00000451404 | sg00000136856 | slc2a8-209 | 9 | 127397155 | 127405555 | + | mRNA | protein_coding |
| -356896 | enst00000610552 | sg00000136856 | slc2a8-215 | 9 | 127397138 | 127407855 | + | mRNA | protein_coding |
| 363040 | enst00000418747 | sg00000234771 | slc25a25-as1-201 | 9 | 128108581 | 128118693 | - | lnc_RNA | lncrna |
| -365622 | enst00000463005 | sg00000136895 | garnl3-212 | 9 | 127388412 | 127393134 | + | lnc_RNA | retained_intron |
| -366904 | enst00000497703 | sg00000136895 | garnl3-221 | 9 | 127387130 | 127389005 | + | lnc_RNA | retained_intron |
| 368102 | enst00000476655 | sg00000148334 | ptges2-205 | 9 | 128120751 | 128123755 | - | lnc_RNA | retained_intron |
| 369600 | enst00000493205 | sg00000148334 | ptges2-211 | 9 | 128120752 | 128125253 | - | lnc_RNA | retained_intron |
| 372022 | enst00000474124 | sg00000148334 | ptges2-204 | 9 | 128122448 | 128127675 | - | lnc_RNA | processed_transcript |
| 372056 | enst00000483625 | sg00000148334 | ptges2-207 | 9 | 128123008 | 128127709 | - | lnc_RNA | processed_transcript |
| 372058 | enst00000485510 | sg00000148334 | ptges2-209 | 9 | 128124331 | 128127711 | - | lnc_RNA | retained_intron |
| 372064 | enst00000496594 | sg00000148334 | ptges2-212 | 9 | 128120723 | 128127717 | - | lnc_RNA | retained_intron |
| 372071 | enst00000449878 | sg00000148334 | ptges2-203 | 9 | 128122466 | 128127724 | - | mRNA | protein_coding |
| 372076 | enst00000338961 | sg00000148334 | ptges2-202 | 9 | 128120693 | 128127729 | - | mRNA | protein_coding |
| 372461 | enst00000485237 | sg00000148334 | ptges2-208 | 9 | 128125244 | 128128114 | - | lnc_RNA | processed_transcript |
| 372493 | enst00000487063 | sg00000148334 | ptges2-210 | 9 | 128122446 | 128128146 | - | lnc_RNA | processed_transcript |
| 372535 | enst00000617202 | sg00000148334 | ptges2-214 | 9 | 128120694 | 128128188 | - | mRNA | protein_coding |
| 372742 | enst00000476748 | sg00000148334 | ptges2-206 | 9 | 128122991 | 128128395 | - | lnc_RNA | processed_transcript |
| 372765 | enst00000497109 | sg00000148334 | ptges2-213 | 9 | 128123122 | 128128418 | - | lnc_RNA | processed_transcript |
| 372809 | enst00000277462 | sg00000148334 | ptges2-201 | 9 | 128120694 | 128128462 | - | mRNA | protein_coding |
| 372876 | enst00000443493 | sg00000232850 | al590708.1-201 | 9 | 128128529 | 128130628 | + | lnc_RNA | lncrna |
| -387264 | enst00000607259 | sg00000271833 | al445222.2-201 | 9 | 127366770 | 127367397 | + | lnc_RNA | lncrna |
| -392318 | enst00000481242 | sg00000136895 | garnl3-216 | 9 | 127361716 | 127393538 | + | lnc_RNA | retained_intron |
| 393418 | enst00000373017 | sg00000148346 | lcn2-203 | 9 | 128149071 | 128153133 | + | mRNA | protein_coding |
| 393788 | enst00000470902 | sg00000148346 | lcn2-204 | 9 | 128149441 | 128153453 | + | lnc_RNA | processed_transcript |
| 393800 | enst00000277480 | sg00000148346 | lcn2-201 | 9 | 128149453 | 128153453 | + | mRNA | protein_coding |
| 393819 | enst00000487719 | sg00000148346 | lcn2-205 | 9 | 128149472 | 128150609 | + | lnc_RNA | retained_intron |
| 393865 | enst00000372998 | sg00000148346 | lcn2-202 | 9 | 128149518 | 128153139 | + | mRNA | protein_coding |
| 395847 | enst00000488391 | sg00000148346 | lcn2-206 | 9 | 128151500 | 128153328 | + | lnc_RNA | retained_intron |
| 396016 | enst00000494317 | sg00000148346 | lcn2-207 | 9 | 128151669 | 128153453 | + | lnc_RNA | processed_transcript |
| -398678 | enst00000496711 | sg00000136895 | garnl3-220 | 9 | 127355356 | 127393539 | + | lnc_RNA | processed_transcript |
| -398726 | enst00000478696 | sg00000136895 | garnl3-214 | 9 | 127355308 | 127369118 | + | lnc_RNA | processed_transcript |
| -400516 | enst00000481875 | sg00000136895 | garnl3-217 | 9 | 127353518 | 127355391 | + | lnc_RNA | retained_intron |
| 404612 | enst00000372994 | sg00000171159 | c9orf16-201 | 9 | 128160265 | 128163924 | + | mRNA | protein_coding |
| 404661 | enst00000492588 | sg00000171159 | c9orf16-204 | 9 | 128160314 | 128163890 | + | lnc_RNA | processed_transcript |
| 404706 | enst00000489240 | sg00000171159 | c9orf16-203 | 9 | 128160359 | 128163546 | + | lnc_RNA | processed_transcript |
| 404807 | enst00000486420 | sg00000171159 | c9orf16-202 | 9 | 128160460 | 128163737 | + | lnc_RNA | processed_transcript |
| 411344 | enst00000491487 | sg00000148337 | ciz1-222 | 9 | 128166307 | 128166997 | - | lnc_RNA | processed_transcript |
| -411719 | enst00000460176 | sg00000136895 | garnl3-211 | 9 | 127342315 | 127355449 | + | mRNA | nonsense_mediated_decay |
| 411820 | enst00000485862 | sg00000148337 | ciz1-220 | 9 | 128166065 | 128167473 | - | lnc_RNA | processed_transcript |
| 412030 | enst00000461765 | sg00000148337 | ciz1-210 | 9 | 128166067 | 128167683 | - | lnc_RNA | processed_transcript |
| 413450 | enst00000485001 | sg00000148337 | ciz1-219 | 9 | 128166621 | 128169103 | - | lnc_RNA | processed_transcript |
| 413798 | enst00000476541 | sg00000148337 | ciz1-217 | 9 | 128168735 | 128169451 | - | lnc_RNA | retained_intron |
| 413808 | enst00000471773 | sg00000148337 | ciz1-212 | 9 | 128166064 | 128169461 | - | lnc_RNA | processed_transcript |
| 421955 | enst00000471839 | sg00000148337 | ciz1-213 | 9 | 128166269 | 128177608 | - | mRNA | protein_coding |
| 423356 | enst00000475471 | sg00000148337 | ciz1-215 | 9 | 128177569 | 128179009 | - | lnc_RNA | processed_transcript |
| 425145 | enst00000476239 | sg00000148337 | ciz1-216 | 9 | 128177588 | 128180798 | - | lnc_RNA | processed_transcript |
| 434814 | enst00000474442 | sg00000148337 | ciz1-214 | 9 | 128180799 | 128190467 | - | lnc_RNA | processed_transcript |
| 435057 | enst00000415526 | sg00000148337 | ciz1-208 | 9 | 128166152 | 128190710 | - | mRNA | protein_coding |
| 435181 | enst00000491954 | sg00000148337 | ciz1-223 | 9 | 128179214 | 128190834 | - | lnc_RNA | processed_transcript |
| 435204 | enst00000393608 | sg00000148337 | ciz1-207 | 9 | 128166066 | 128190857 | - | mRNA | protein_coding |
| 435205 | enst00000498156 | sg00000148337 | ciz1-224 | 9 | 128179378 | 128190858 | - | lnc_RNA | processed_transcript |
| 435207 | enst00000277465 | sg00000148337 | ciz1-201 | 9 | 128166071 | 128190860 | - | mRNA | protein_coding |
| 435799 | enst00000420484 | sg00000148337 | ciz1-209 | 9 | 128185629 | 128191452 | - | mRNA | protein_coding |
| 435835 | enst00000488559 | sg00000148337 | ciz1-221 | 9 | 128179051 | 128191488 | - | lnc_RNA | processed_transcript |
| 435897 | enst00000476727 | sg00000148337 | ciz1-218 | 9 | 128166759 | 128191550 | - | lnc_RNA | processed_transcript |
| 435904 | enst00000467178 | sg00000148337 | ciz1-211 | 9 | 128179117 | 128191557 | - | lnc_RNA | processed_transcript |
| 435915 | enst00000372954 | sg00000148337 | ciz1-206 | 9 | 128166065 | 128191568 | - | mRNA | protein_coding |
| 435919 | enst00000372938 | sg00000148337 | ciz1-204 | 9 | 128166065 | 128191572 | - | mRNA | protein_coding |
| 435919 | enst00000629610 | sg00000148337 | ciz1-226 | 9 | 128166069 | 128191572 | - | mRNA | protein_coding |
| 435936 | enst00000357558 | sg00000148337 | ciz1-203 | 9 | 128166066 | 128191589 | - | mRNA | protein_coding |
| 436002 | enst00000635766 | sg00000106976 | dnm1-217 | 9 | 128191655 | 128218281 | + | lnc_RNA | processed_transcript |
| 436068 | enst00000636874 | sg00000106976 | dnm1-224 | 9 | 128191721 | 128218296 | + | lnc_RNA | processed_transcript |
| 436124 | enst00000324544 | sg00000148337 | ciz1-202 | 9 | 128180448 | 128191777 | - | mRNA | protein_coding |
| 436286 | enst00000538431 | sg00000148337 | ciz1-225 | 9 | 128166066 | 128191939 | - | mRNA | protein_coding |
| -440681 | enst00000495172 | sg00000136895 | garnl3-219 | 9 | 127313353 | 127336222 | + | lnc_RNA | retained_intron |
| 444312 | enst00000651955 | sg00000148337 | ciz1-229 | 9 | 128161251 | 128199965 | - | mRNA | protein_coding |
| 447699 | enst00000372923 | sg00000106976 | dnm1-202 | 9 | 128203352 | 128255244 | + | mRNA | protein_coding |
| 447726 | enst00000341179 | sg00000106976 | dnm1-201 | 9 | 128203379 | 128255244 | + | mRNA | protein_coding |
| 447726 | enst00000475805 | sg00000106976 | dnm1-206 | 9 | 128203379 | 128254055 | + | mRNA | protein_coding |
| 447735 | enst00000393594 | sg00000106976 | dnm1-203 | 9 | 128203388 | 128255244 | + | mRNA | protein_coding |
| 447744 | enst00000628346 | sg00000106976 | dnm1-213 | 9 | 128203397 | 128255244 | + | mRNA | protein_coding |
| 447753 | enst00000636280 | sg00000106976 | dnm1-222 | 9 | 128203406 | 128223954 | + | mRNA | nonsense_mediated_decay |
| 447762 | enst00000486160 | sg00000106976 | dnm1-208 | 9 | 128203415 | 128255244 | + | mRNA | protein_coding |
| 447764 | enst00000627061 | sg00000106976 | dnm1-211 | 9 | 128203417 | 128254876 | + | mRNA | protein_coding |
| 447764 | enst00000627543 | sg00000106976 | dnm1-212 | 9 | 128203417 | 128255246 | + | mRNA | protein_coding |
| 447818 | enst00000634267 | sg00000106976 | dnm1-216 | 9 | 128203471 | 128255024 | + | mRNA | protein_coding |
| 448569 | enst00000634501 | sg00000148337 | ciz1-227 | 9 | 128196847 | 128204222 | - | lnc_RNA | processed_transcript |
| 448571 | enst00000634901 | sg00000148337 | ciz1-228 | 9 | 128166089 | 128204224 | - | mRNA | protein_coding |
| 448730 | enst00000372948 | sg00000148337 | ciz1-205 | 9 | 128166071 | 128204383 | - | mRNA | protein_coding |
| 449169 | enst00000636103 | sg00000106976 | dnm1-219 | 9 | 128204822 | 128218299 | + | lnc_RNA | processed_transcript |
| -453052 | enst00000439400 | sg00000229369 | al450263.2-201 | 9 | 127300093 | 127300982 | - | pseudogenic_transcript | processed_pseudogene |
| 462590 | enst00000637999 | sg00000106976 | dnm1-227 | 9 | 128218243 | 128242295 | + | mRNA | nonsense_mediated_decay |
| 462616 | enst00000441149 | sg00000106976 | dnm1-204 | 9 | 128218269 | 128251244 | + | lnc_RNA | retained_intron |
| 463013 | enst00000637094 | sg00000106976 | dnm1-225 | 9 | 128218666 | 128218946 | + | lnc_RNA | processed_transcript |
| 466876 | enst00000482638 | sg00000106976 | dnm1-207 | 9 | 128222529 | 128242267 | + | mRNA | nonsense_mediated_decay |
| 470485 | enst00000637317 | sg00000106976 | dnm1-226 | 9 | 128226138 | 128232634 | + | lnc_RNA | processed_transcript |
| 476983 | enst00000635859 | sg00000106976 | dnm1-218 | 9 | 128232636 | 128234024 | + | lnc_RNA | processed_transcript |
| 477911 | enst00000463998 | sg00000106976 | dnm1-205 | 9 | 128233564 | 128246471 | + | lnc_RNA | retained_intron |
| 484075 | enst00000636220 | sg00000106976 | dnm1-221 | 9 | 128239728 | 128240485 | + | lnc_RNA | processed_transcript |
| 484831 | enst00000638061 | sg00000106976 | dnm1-229 | 9 | 128240484 | 128240687 | + | lnc_RNA | processed_transcript |
| 484859 | enst00000631179 | sg00000106976 | dnm1-215 | 9 | 128240512 | 128247425 | + | lnc_RNA | processed_transcript |
| 485095 | enst00000493925 | sg00000106976 | dnm1-209 | 9 | 128240748 | 128247391 | + | lnc_RNA | processed_transcript |
| 486653 | enst00000636201 | sg00000106976 | dnm1-220 | 9 | 128242306 | 128247384 | + | mRNA | protein_coding |
| -489032 | enst00000464616 | sg00000136895 | garnl3-213 | 9 | 127265002 | 127339750 | + | lnc_RNA | processed_transcript |
| -489111 | enst00000373386 | sg00000136895 | garnl3-201 | 9 | 127264923 | 127393539 | + | mRNA | nonsense_mediated_decay |
| 489177 | enst00000384849 | sg00000207581 | mir199b-201 | 9 | 128244721 | 128244830 | - | miRNA | mirna |
| -489260 | enst00000373387 | sg00000136895 | garnl3-202 | 9 | 127264774 | 127393660 | + | mRNA | protein_coding |
| 489377 | enst00000577829 | sg00000264823 | mir3154-201 | 9 | 128244947 | 128245030 | - | miRNA | mirna |
| -489521 | enst00000487565 | sg00000136895 | garnl3-218 | 9 | 127264513 | 127311676 | + | lnc_RNA | processed_transcript |
| -489798 | enst00000498801 | sg00000136895 | garnl3-222 | 9 | 127264236 | 127320768 | + | lnc_RNA | processed_transcript |
| -490372 | enst00000425970 | sg00000136895 | garnl3-203 | 9 | 127263662 | 127320778 | + | mRNA | protein_coding |
| -490372 | enst00000435213 | sg00000136895 | garnl3-205 | 9 | 127263662 | 127393547 | + | mRNA | protein_coding |
| 495149 | enst00000625457 | sg00000106976 | dnm1-210 | 9 | 128250802 | 128254162 | + | mRNA | protein_coding |
| 495286 | enst00000630850 | sg00000106976 | dnm1-214 | 9 | 128250939 | 128255248 | + | lnc_RNA | retained_intron |
| 497449 | enst00000638030 | sg00000106976 | dnm1-228 | 9 | 128253102 | 128253834 | + | lnc_RNA | processed_transcript |
| 497474 | enst00000636760 | sg00000106976 | dnm1-223 | 9 | 128253127 | 128253979 | + | lnc_RNA | processed_transcript |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc