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CpG interval report generated on 20/05/20 with pycoMeth 0.4.6
Interval details
| pvalue rank | chromosome | start | end | length | number of samples | number of CpGs | pvalue | adjusted pvalue |
|---|---|---|---|---|---|---|---|---|
| #13 | 19 | 13097401 | 13099852 | 2451 | 3 | 75 | 1.89716e-28 | 1.45133e-25 |
Methylation log-likelihood ratio by CpG position
Distribution of CpG methylation log-likelihood ratio by sample
Closest transcripts TSS
| distance to tss | transcript id | gene id | transcript name | chromosome | start | end | strand | feature type | transcript biotype |
|---|---|---|---|---|---|---|---|---|---|
| 2872 | enst00000590120 | sg00000104903 | lyl1-202 | 19 | 13101178 | 13102724 | - | lnc_RNA | retained_intron |
| 3006 | enst00000264824 | sg00000104903 | lyl1-201 | 19 | 13099033 | 13102858 | - | mRNA | protein_coding |
| 3309 | enst00000590974 | sg00000104903 | lyl1-203 | 19 | 13100690 | 13103161 | - | mRNA | protein_coding |
| 9790 | enst00000585435 | sg00000104907 | trmt1-204 | 19 | 13107602 | 13109642 | - | lnc_RNA | retained_intron |
| 9880 | enst00000586830 | sg00000104907 | trmt1-207 | 19 | 13107775 | 13109732 | - | lnc_RNA | retained_intron |
| -15435 | enst00000625100 | sg00000279044 | ac007787.2-201 | 19 | 13081966 | 13082564 | + | unconfirmed_transcript | tec |
| 16175 | enst00000587633 | sg00000104907 | trmt1-209 | 19 | 13110186 | 13116027 | - | mRNA | nonsense_mediated_decay |
| 16307 | enst00000593257 | sg00000104907 | trmt1-223 | 19 | 13112955 | 13116159 | - | lnc_RNA | processed_transcript |
| 16770 | enst00000592729 | sg00000104907 | trmt1-219 | 19 | 13115441 | 13116622 | - | lnc_RNA | processed_transcript |
| 16797 | enst00000437766 | sg00000104907 | trmt1-203 | 19 | 13104902 | 13116649 | - | mRNA | protein_coding |
| 16805 | enst00000221504 | sg00000104907 | trmt1-201 | 19 | 13104907 | 13116657 | - | mRNA | protein_coding |
| 16850 | enst00000587487 | sg00000104907 | trmt1-208 | 19 | 13109645 | 13116702 | - | mRNA | protein_coding |
| 16860 | enst00000592814 | sg00000104907 | trmt1-220 | 19 | 13110158 | 13116712 | - | mRNA | protein_coding |
| 16869 | enst00000585622 | sg00000104907 | trmt1-205 | 19 | 13115702 | 13116721 | - | lnc_RNA | retained_intron |
| 16873 | enst00000588511 | sg00000104907 | trmt1-211 | 19 | 13104939 | 13116725 | - | lnc_RNA | retained_intron |
| 16881 | enst00000588813 | sg00000104907 | trmt1-213 | 19 | 13115379 | 13116733 | - | lnc_RNA | processed_transcript |
| 16884 | enst00000588229 | sg00000104907 | trmt1-210 | 19 | 13115871 | 13116736 | - | mRNA | protein_coding |
| 16884 | enst00000588746 | sg00000104907 | trmt1-212 | 19 | 13115458 | 13116736 | - | mRNA | nonsense_mediated_decay |
| 16884 | enst00000591425 | sg00000104907 | trmt1-215 | 19 | 13115423 | 13116736 | - | lnc_RNA | processed_transcript |
| 16888 | enst00000593157 | sg00000104907 | trmt1-222 | 19 | 13104907 | 13116740 | - | lnc_RNA | retained_intron |
| 16896 | enst00000592892 | sg00000104907 | trmt1-221 | 19 | 13115627 | 13116748 | - | lnc_RNA | processed_transcript |
| 16896 | enst00000586224 | sg00000104907 | trmt1-206 | 19 | 13115464 | 13116748 | - | mRNA | nonsense_mediated_decay |
| 16897 | enst00000357720 | sg00000104907 | trmt1-202 | 19 | 13104902 | 13116749 | - | mRNA | protein_coding |
| 16897 | enst00000591717 | sg00000104907 | trmt1-216 | 19 | 13113001 | 13116749 | - | mRNA | nonsense_mediated_decay |
| 16907 | enst00000590812 | sg00000104907 | trmt1-214 | 19 | 13115836 | 13116759 | - | lnc_RNA | retained_intron |
| 16907 | enst00000592606 | sg00000104907 | trmt1-218 | 19 | 13115947 | 13116759 | - | lnc_RNA | retained_intron |
| 17010 | enst00000586171 | sg00000160877 | nacc1-203 | 19 | 13116862 | 13135704 | + | mRNA | protein_coding |
| 17715 | enst00000592062 | sg00000104907 | trmt1-217 | 19 | 13104907 | 13117567 | - | mRNA | protein_coding |
| 18412 | enst00000292431 | sg00000160877 | nacc1-201 | 19 | 13118264 | 13141147 | + | mRNA | protein_coding |
| -26027 | enst00000588095 | sg00000267610 | ac007787.1-201 | 19 | 13069792 | 13071374 | - | lnc_RNA | lncrna |
| -27398 | enst00000588680 | sg00000008441 | nfix-211 | 19 | 13070003 | 13074019 | + | lnc_RNA | processed_transcript |
| 31719 | enst00000591837 | sg00000266897 | ac005546.1-201 | 19 | 13131571 | 13132410 | + | lnc_RNA | lncrna |
| 37427 | enst00000585663 | sg00000160877 | nacc1-202 | 19 | 13137279 | 13138736 | + | mRNA | protein_coding |
| 41295 | enst00000591825 | sg00000267512 | ac011446.1-201 | 19 | 13139617 | 13141147 | - | lnc_RNA | lncrna |
| 45562 | enst00000591415 | sg00000104915 | stx10-209 | 19 | 13144615 | 13145414 | - | mRNA | protein_coding |
| 49987 | enst00000593126 | sg00000104915 | stx10-211 | 19 | 13144271 | 13149839 | - | mRNA | protein_coding |
| 50033 | enst00000587318 | sg00000104915 | stx10-205 | 19 | 13144062 | 13149885 | - | mRNA | protein_coding |
| 50326 | enst00000242770 | sg00000104915 | stx10-201 | 19 | 13144062 | 13150178 | - | mRNA | protein_coding |
| 50374 | enst00000589083 | sg00000104915 | stx10-207 | 19 | 13144062 | 13150226 | - | mRNA | protein_coding |
| 50435 | enst00000591843 | sg00000104915 | stx10-210 | 19 | 13144058 | 13150287 | - | mRNA | nonsense_mediated_decay |
| 50461 | enst00000588848 | sg00000104915 | stx10-206 | 19 | 13144601 | 13150313 | - | mRNA | protein_coding |
| 50489 | enst00000440593 | sg00000104915 | stx10-203 | 19 | 13144489 | 13150341 | - | mRNA | nonsense_mediated_decay |
| 50494 | enst00000343587 | sg00000104915 | stx10-202 | 19 | 13144058 | 13150346 | - | mRNA | protein_coding |
| 50523 | enst00000587230 | sg00000104915 | stx10-204 | 19 | 13144058 | 13150375 | - | mRNA | protein_coding |
| 50531 | enst00000591197 | sg00000104915 | stx10-208 | 19 | 13145303 | 13150383 | - | mRNA | protein_coding |
| 50559 | enst00000292433 | sg00000160888 | ier2-201 | 19 | 13150411 | 13154911 | + | mRNA | protein_coding |
| 50563 | enst00000587885 | sg00000160888 | ier2-202 | 19 | 13150415 | 13154249 | + | mRNA | protein_coding |
| 52123 | enst00000588173 | sg00000160888 | ier2-203 | 19 | 13151975 | 13154908 | + | mRNA | protein_coding |
| 53061 | enst00000656618 | sg00000287296 | ac011446.3-201 | 19 | 13152252 | 13152913 | - | lnc_RNA | lncrna |
| 53860 | enst00000586483 | sg00000267598 | ac011446.2-201 | 19 | 13153071 | 13153712 | - | lnc_RNA | lncrna |
| 54341 | enst00000592882 | sg00000267598 | ac011446.2-202 | 19 | 13153096 | 13154193 | - | lnc_RNA | lncrna |
| 58936 | enst00000481802 | sg00000213253 | rpl12p42-201 | 19 | 13157959 | 13158788 | - | pseudogenic_transcript | processed_pseudogene |
| -72462 | enst00000587260 | sg00000008441 | nfix-208 | 19 | 13024939 | 13094770 | + | mRNA | protein_coding |
| -72774 | enst00000586873 | sg00000008441 | nfix-207 | 19 | 13024627 | 13025510 | + | mRNA | protein_coding |
| -72788 | enst00000591028 | sg00000008441 | nfix-213 | 19 | 13024613 | 13025495 | + | mRNA | protein_coding |
| -72816 | enst00000586797 | sg00000008441 | nfix-206 | 19 | 13024585 | 13094684 | + | mRNA | nonsense_mediated_decay |
| -72820 | enst00000588228 | sg00000008441 | nfix-210 | 19 | 13024581 | 13094755 | + | mRNA | protein_coding |
| -72821 | enst00000358552 | sg00000008441 | nfix-201 | 19 | 13024580 | 13098766 | + | mRNA | protein_coding |
| -72821 | enst00000360105 | sg00000008441 | nfix-202 | 19 | 13024580 | 13098796 | + | mRNA | protein_coding |
| -73369 | enst00000585575 | sg00000008441 | nfix-205 | 19 | 13024032 | 13094649 | + | mRNA | protein_coding |
| -73410 | enst00000587760 | sg00000008441 | nfix-209 | 19 | 13023991 | 13094758 | + | mRNA | protein_coding |
| -82890 | enst00000586630 | sg00000267417 | ac138474.1-201 | 19 | 13013662 | 13014511 | - | lnc_RNA | lncrna |
| -85194 | enst00000585382 | sg00000008441 | nfix-204 | 19 | 13012207 | 13081835 | + | mRNA | nonsense_mediated_decay |
| -85213 | enst00000590027 | sg00000008441 | nfix-212 | 19 | 13012188 | 13025520 | + | mRNA | protein_coding |
| -101563 | enst00000592199 | sg00000008441 | nfix-214 | 19 | 12995838 | 13094649 | + | mRNA | protein_coding |
| -101793 | enst00000397661 | sg00000008441 | nfix-203 | 19 | 12995608 | 13096201 | + | mRNA | protein_coding |
| 114699 | enst00000638114 | sg00000141837 | cacna1a-259 | 19 | 13213868 | 13214551 | - | lnc_RNA | retained_intron |
| 115382 | enst00000636074 | sg00000141837 | cacna1a-224 | 19 | 13213719 | 13215234 | - | lnc_RNA | retained_intron |
| 125104 | enst00000586190 | sg00000141837 | cacna1a-207 | 19 | 13214440 | 13224956 | - | lnc_RNA | retained_intron |
| 125462 | enst00000636610 | sg00000141837 | cacna1a-228 | 19 | 13208892 | 13225314 | - | lnc_RNA | retained_intron |
| 126703 | enst00000635988 | sg00000141837 | cacna1a-220 | 19 | 13213783 | 13226555 | - | lnc_RNA | retained_intron |
| 127830 | enst00000636670 | sg00000141837 | cacna1a-229 | 19 | 13226943 | 13227682 | - | lnc_RNA | retained_intron |
| -127919 | enst00000317060 | sg00000179284 | dand5-201 | 19 | 12969482 | 12974762 | + | mRNA | protein_coding |
| 131884 | enst00000636768 | sg00000141837 | cacna1a-230 | 19 | 13208996 | 13231736 | - | mRNA | nonsense_mediated_decay |
| -132242 | enst00000585548 | sg00000179284 | dand5-202 | 19 | 12965159 | 12974524 | + | mRNA | protein_coding |
| 135822 | enst00000637832 | sg00000141837 | cacna1a-252 | 19 | 13228617 | 13235674 | - | lnc_RNA | retained_intron |
| 136033 | enst00000593267 | sg00000141837 | cacna1a-213 | 19 | 13234808 | 13235885 | - | lnc_RNA | retained_intron |
| -140178 | enst00000316939 | sg00000179271 | gadd45gip1-201 | 19 | 12953119 | 12957223 | - | mRNA | protein_coding |
| -145037 | enst00000591467 | sg00000179262 | rad23a-207 | 19 | 12952364 | 12952990 | + | lnc_RNA | retained_intron |
| 145363 | enst00000637777 | sg00000141837 | cacna1a-249 | 19 | 13228790 | 13245215 | - | mRNA | nonsense_mediated_decay |
| 145666 | enst00000637809 | sg00000141837 | cacna1a-250 | 19 | 13230132 | 13245518 | - | lnc_RNA | retained_intron |
| 145793 | enst00000637475 | sg00000141837 | cacna1a-241 | 19 | 13243671 | 13245645 | - | lnc_RNA | retained_intron |
| -148317 | enst00000590881 | sg00000179262 | rad23a-206 | 19 | 12949084 | 12953595 | + | mRNA | protein_coding |
| -148712 | enst00000586375 | sg00000179262 | rad23a-202 | 19 | 12948689 | 12953405 | + | mRNA | nonsense_mediated_decay |
| -151396 | enst00000588826 | sg00000179262 | rad23a-205 | 19 | 12946005 | 12949576 | + | lnc_RNA | processed_transcript |
| -151507 | enst00000593114 | sg00000179262 | rad23a-210 | 19 | 12945894 | 12953613 | + | mRNA | nonsense_mediated_decay |
| -151509 | enst00000592268 | sg00000179262 | rad23a-209 | 19 | 12945892 | 12953591 | + | mRNA | protein_coding |
| -151525 | enst00000316856 | sg00000179262 | rad23a-201 | 19 | 12945876 | 12953623 | + | mRNA | protein_coding |
| -151535 | enst00000588329 | sg00000179262 | rad23a-204 | 19 | 12945866 | 12949282 | + | lnc_RNA | retained_intron |
| -151539 | enst00000586534 | sg00000179262 | rad23a-203 | 19 | 12945862 | 12953642 | + | mRNA | protein_coding |
| -151542 | enst00000651137 | sg00000179262 | rad23a-211 | 19 | 12945859 | 12953640 | + | mRNA | nonsense_mediated_decay |
| -151546 | enst00000591499 | sg00000179262 | rad23a-208 | 19 | 12945855 | 12953269 | + | mRNA | nonsense_mediated_decay |
| -152914 | enst00000589120 | sg00000267458 | ac092069.1-201 | 19 | 12944118 | 12944487 | - | lnc_RNA | lncrna |
| 153143 | enst00000636058 | sg00000141837 | cacna1a-223 | 19 | 13231769 | 13252995 | - | mRNA | nonsense_mediated_decay |
| 153159 | enst00000585802 | sg00000141837 | cacna1a-206 | 19 | 13207266 | 13253011 | - | mRNA | protein_coding |
| 153159 | enst00000636473 | sg00000141837 | cacna1a-226 | 19 | 13208046 | 13253011 | - | mRNA | protein_coding |
| 153228 | enst00000574822 | sg00000141837 | cacna1a-204 | 19 | 13229062 | 13253080 | - | lnc_RNA | processed_transcript |
| -153528 | enst00000586967 | sg00000179218 | calr-204 | 19 | 12943873 | 12944489 | + | mRNA | nonsense_mediated_decay |
| -154188 | enst00000586803 | sg00000179218 | calr-203 | 19 | 12943213 | 12943962 | + | lnc_RNA | retained_intron |
| 155246 | enst00000573891 | sg00000141837 | cacna1a-203 | 19 | 13230133 | 13255098 | - | mRNA | nonsense_mediated_decay |
| 155395 | enst00000637819 | sg00000141837 | cacna1a-251 | 19 | 13212707 | 13255247 | - | mRNA | protein_coding |
| -156917 | enst00000619843 | sg00000274417 | mir6515-201 | 19 | 12940484 | 12940540 | + | miRNA | mirna |
| -157004 | enst00000586760 | sg00000179218 | calr-202 | 19 | 12940397 | 12944403 | + | mRNA | protein_coding |
| 157548 | enst00000587525 | sg00000141837 | cacna1a-209 | 19 | 13206494 | 13257400 | - | mRNA | protein_coding |
| -158756 | enst00000588454 | sg00000179218 | calr-206 | 19 | 12938645 | 12940872 | + | mRNA | protein_coding |
| -158787 | enst00000590325 | sg00000179218 | calr-207 | 19 | 12938614 | 12940370 | + | lnc_RNA | retained_intron |
| -158794 | enst00000316448 | sg00000179218 | calr-201 | 19 | 12938607 | 12944489 | + | mRNA | protein_coding |
| -158823 | enst00000587486 | sg00000179218 | calr-205 | 19 | 12938578 | 12940147 | + | lnc_RNA | retained_intron |
| 159314 | enst00000637168 | sg00000141837 | cacna1a-237 | 19 | 13256188 | 13259166 | - | lnc_RNA | retained_intron |
| 159755 | enst00000637297 | sg00000141837 | cacna1a-239 | 19 | 13231769 | 13259607 | - | mRNA | protein_coding |
| 160382 | enst00000636984 | sg00000141837 | cacna1a-234 | 19 | 13256255 | 13260234 | - | lnc_RNA | retained_intron |
| 162853 | enst00000590205 | sg00000141837 | cacna1a-210 | 19 | 13259366 | 13262705 | - | lnc_RNA | retained_intron |
| 162959 | enst00000635742 | sg00000141837 | cacna1a-216 | 19 | 13229689 | 13262811 | - | lnc_RNA | retained_intron |
| 163292 | enst00000637692 | sg00000141837 | cacna1a-245 | 19 | 13245209 | 13263144 | - | lnc_RNA | retained_intron |
| -163364 | enst00000588025 | sg00000179115 | farsa-207 | 19 | 12922479 | 12934037 | - | mRNA | protein_coding |
| 163658 | enst00000636816 | sg00000141837 | cacna1a-231 | 19 | 13252567 | 13263510 | - | lnc_RNA | retained_intron |
| -163687 | enst00000423140 | sg00000179115 | farsa-202 | 19 | 12922480 | 12933714 | - | mRNA | protein_coding |
| -163690 | enst00000587981 | sg00000179115 | farsa-206 | 19 | 12930307 | 12933711 | - | mRNA | protein_coding |
| -163690 | enst00000314606 | sg00000179115 | farsa-201 | 19 | 12922479 | 12933711 | - | mRNA | protein_coding |
| -163703 | enst00000592662 | sg00000179115 | farsa-209 | 19 | 12928398 | 12933698 | - | lnc_RNA | retained_intron |
| -163705 | enst00000586146 | sg00000179115 | farsa-203 | 19 | 12922530 | 12933696 | - | mRNA | nonsense_mediated_decay |
| -163705 | enst00000588965 | sg00000179115 | farsa-208 | 19 | 12922540 | 12933696 | - | lnc_RNA | retained_intron |
| -163721 | enst00000593021 | sg00000179115 | farsa-210 | 19 | 12924151 | 12933680 | - | mRNA | protein_coding |
| -163759 | enst00000586280 | sg00000179115 | farsa-204 | 19 | 12928410 | 12933642 | - | lnc_RNA | retained_intron |
| -166879 | enst00000592636 | sg00000266975 | farsa-as1-201 | 19 | 12930522 | 12933296 | + | lnc_RNA | lncrna |
| -168962 | enst00000587488 | sg00000179115 | farsa-205 | 19 | 12922545 | 12928439 | - | mRNA | protein_coding |
| -177081 | enst00000579717 | sg00000266721 | mir5695-201 | 19 | 12920320 | 12920404 | + | miRNA | mirna |
| 178081 | enst00000637485 | sg00000141837 | cacna1a-242 | 19 | 13271341 | 13277933 | - | lnc_RNA | retained_intron |
| -178108 | enst00000293695 | sg00000161860 | syce2-201 | 19 | 12898786 | 12919293 | - | mRNA | protein_coding |
| 184716 | enst00000637774 | sg00000141837 | cacna1a-248 | 19 | 13273938 | 13284568 | - | lnc_RNA | retained_intron |
| 186669 | enst00000637004 | sg00000141837 | cacna1a-235 | 19 | 13243769 | 13286521 | - | lnc_RNA | retained_intron |
| 186695 | enst00000635917 | sg00000141837 | cacna1a-219 | 19 | 13252517 | 13286547 | - | lnc_RNA | retained_intron |
| 186702 | enst00000635786 | sg00000141837 | cacna1a-217 | 19 | 13273498 | 13286554 | - | lnc_RNA | retained_intron |
| -191198 | enst00000591229 | sg00000161860 | syce2-202 | 19 | 12904517 | 12906203 | - | lnc_RNA | processed_transcript |
| -196917 | enst00000592819 | sg00000161860 | syce2-203 | 19 | 12899082 | 12900484 | - | mRNA | protein_coding |
| -197830 | enst00000588242 | sg00000105607 | gcdh-207 | 19 | 12899571 | 12900670 | + | lnc_RNA | processed_transcript |
| -200021 | enst00000591050 | sg00000105607 | gcdh-215 | 19 | 12897380 | 12914207 | + | mRNA | protein_coding |
| -200098 | enst00000590472 | sg00000105607 | gcdh-211 | 19 | 12897303 | 12898383 | + | mRNA | protein_coding |
| -203268 | enst00000464444 | sg00000240616 | rps6p25-201 | 19 | 12894133 | 12894880 | + | pseudogenic_transcript | processed_pseudogene |
| -206132 | enst00000591043 | sg00000105607 | gcdh-214 | 19 | 12891269 | 12899678 | + | lnc_RNA | retained_intron |
| -206132 | enst00000585760 | sg00000105607 | gcdh-204 | 19 | 12891269 | 12892283 | + | lnc_RNA | retained_intron |
| -206221 | enst00000585420 | sg00000105607 | gcdh-203 | 19 | 12891180 | 12899624 | + | lnc_RNA | retained_intron |
| -206221 | enst00000587832 | sg00000105607 | gcdh-206 | 19 | 12891180 | 12893882 | + | lnc_RNA | retained_intron |
| -206221 | enst00000590627 | sg00000105607 | gcdh-213 | 19 | 12891180 | 12893834 | + | lnc_RNA | retained_intron |
| -206224 | enst00000587072 | sg00000105607 | gcdh-205 | 19 | 12891177 | 12893493 | + | mRNA | protein_coding |
| -206233 | enst00000588905 | sg00000105607 | gcdh-208 | 19 | 12891168 | 12896015 | + | mRNA | protein_coding |
| -206235 | enst00000590530 | sg00000105607 | gcdh-212 | 19 | 12891166 | 12899969 | + | mRNA | nonsense_mediated_decay |
| -206237 | enst00000590445 | sg00000105607 | gcdh-210 | 19 | 12891164 | 12892129 | + | mRNA | nonsense_mediated_decay |
| -206241 | enst00000222214 | sg00000105607 | gcdh-201 | 19 | 12891160 | 12899999 | + | mRNA | protein_coding |
| -206241 | enst00000591470 | sg00000105607 | gcdh-216 | 19 | 12891160 | 12899946 | + | mRNA | protein_coding |
| -206241 | enst00000421816 | sg00000105607 | gcdh-202 | 19 | 12891160 | 12897477 | + | lnc_RNA | retained_intron |
| -206241 | enst00000589039 | sg00000105607 | gcdh-209 | 19 | 12891160 | 12895995 | + | mRNA | protein_coding |
| 208979 | enst00000637117 | sg00000141837 | cacna1a-236 | 19 | 13307279 | 13308831 | - | lnc_RNA | retained_intron |
| -210200 | enst00000264834 | sg00000105610 | klf1-201 | 19 | 12884422 | 12887201 | - | mRNA | protein_coding |
| -215935 | enst00000592506 | sg00000105612 | dnase2-204 | 19 | 12876254 | 12881466 | - | mRNA | protein_coding |
| -215952 | enst00000222219 | sg00000105612 | dnase2-201 | 19 | 12875209 | 12881449 | - | mRNA | protein_coding |
| -216432 | enst00000592400 | sg00000267735 | ac020934.2-201 | 19 | 12880969 | 12884088 | + | lnc_RNA | lncrna |
| 217275 | enst00000637625 | sg00000141837 | cacna1a-244 | 19 | 13315238 | 13317127 | - | lnc_RNA | retained_intron |
| -218567 | enst00000586547 | sg00000105612 | dnase2-202 | 19 | 12878038 | 12878834 | - | lnc_RNA | retained_intron |
| -218721 | enst00000588777 | sg00000105612 | dnase2-203 | 19 | 12875936 | 12878680 | - | lnc_RNA | retained_intron |
| -224147 | enst00000585791 | sg00000105613 | mast1-202 | 19 | 12873254 | 12874349 | + | lnc_RNA | retained_intron |
| -224661 | enst00000589765 | sg00000095066 | hook2-213 | 19 | 12774159 | 12872740 | - | lnc_RNA | processed_transcript |
| -228800 | enst00000590553 | sg00000105613 | mast1-206 | 19 | 12868601 | 12873640 | + | lnc_RNA | retained_intron |
| 234584 | enst00000636022 | sg00000141837 | cacna1a-222 | 19 | 13312652 | 13334436 | - | lnc_RNA | retained_intron |
| -245141 | enst00000622622 | sg00000276181 | mir6794-201 | 19 | 12852260 | 12852327 | + | miRNA | mirna |
| -245215 | enst00000589040 | sg00000105613 | mast1-204 | 19 | 12852186 | 12865468 | + | lnc_RNA | retained_intron |
| -249582 | enst00000590204 | sg00000105613 | mast1-205 | 19 | 12847819 | 12852171 | + | mRNA | protein_coding |
| -250166 | enst00000592713 | sg00000105613 | mast1-209 | 19 | 12847235 | 12847801 | + | lnc_RNA | retained_intron |
| -256898 | enst00000588379 | sg00000105613 | mast1-203 | 19 | 12840503 | 12858921 | + | mRNA | protein_coding |
| -258886 | enst00000251472 | sg00000105613 | mast1-201 | 19 | 12838515 | 12874952 | + | mRNA | protein_coding |
| -258928 | enst00000590883 | sg00000105613 | mast1-207 | 19 | 12838473 | 12848979 | + | lnc_RNA | retained_intron |
| -261973 | enst00000589272 | sg00000132026 | rtbdn-207 | 19 | 12825479 | 12835428 | - | mRNA | protein_coding |
| -261985 | enst00000322912 | sg00000132026 | rtbdn-201 | 19 | 12825482 | 12835416 | - | mRNA | protein_coding |
| -261986 | enst00000587549 | sg00000132026 | rtbdn-206 | 19 | 12828953 | 12835415 | - | mRNA | protein_coding |
| -261986 | enst00000591512 | sg00000132026 | rtbdn-212 | 19 | 12828893 | 12835415 | - | mRNA | protein_coding |
| -262825 | enst00000592204 | sg00000132026 | rtbdn-213 | 19 | 12825478 | 12834576 | - | mRNA | protein_coding |
| -262853 | enst00000590404 | sg00000132026 | rtbdn-211 | 19 | 12825842 | 12834548 | - | mRNA | protein_coding |
| -263450 | enst00000591495 | sg00000105613 | mast1-208 | 19 | 12833951 | 12858864 | + | mRNA | protein_coding |
| 265607 | enst00000636974 | sg00000141837 | cacna1a-233 | 19 | 13307347 | 13365459 | - | lnc_RNA | retained_intron |
| 266446 | enst00000637952 | sg00000141837 | cacna1a-254 | 19 | 13362405 | 13366298 | - | lnc_RNA | retained_intron |
| -266726 | enst00000393233 | sg00000132026 | rtbdn-202 | 19 | 12825478 | 12830675 | - | mRNA | protein_coding |
| -266726 | enst00000589808 | sg00000132026 | rtbdn-210 | 19 | 12825837 | 12830675 | - | mRNA | protein_coding |
| -266738 | enst00000585384 | sg00000132026 | rtbdn-204 | 19 | 12826790 | 12830663 | - | mRNA | protein_coding |
| -266739 | enst00000589681 | sg00000132026 | rtbdn-209 | 19 | 12825798 | 12830662 | - | mRNA | protein_coding |
| -266746 | enst00000586969 | sg00000132026 | rtbdn-205 | 19 | 12825754 | 12830655 | - | mRNA | protein_coding |
| -266985 | enst00000458671 | sg00000132026 | rtbdn-203 | 19 | 12825483 | 12830416 | - | mRNA | protein_coding |
| -267052 | enst00000589567 | sg00000132026 | rtbdn-208 | 19 | 12826846 | 12830349 | - | mRNA | protein_coding |
| -271690 | enst00000588469 | sg00000267424 | ac020934.1-201 | 19 | 12825711 | 12832983 | + | lnc_RNA | lncrna |
| -290555 | enst00000643757 | sg00000104889 | rnaseh2a-205 | 19 | 12806846 | 12813447 | + | lnc_RNA | retained_intron |
| -290717 | enst00000593017 | sg00000104889 | rnaseh2a-204 | 19 | 12806684 | 12813525 | + | lnc_RNA | retained_intron |
| -290724 | enst00000590121 | sg00000104889 | rnaseh2a-202 | 19 | 12806677 | 12807976 | + | mRNA | protein_coding |
| -290796 | enst00000646769 | sg00000104889 | rnaseh2a-206 | 19 | 12806605 | 12813335 | + | mRNA | nonsense_mediated_decay |
| -290809 | enst00000590279 | sg00000104889 | rnaseh2a-203 | 19 | 12806592 | 12807503 | + | lnc_RNA | retained_intron |
| -290845 | enst00000221486 | sg00000104889 | rnaseh2a-201 | 19 | 12806556 | 12815201 | + | mRNA | protein_coding |
| -295338 | enst00000639767 | sg00000284491 | thsd8-201 | 19 | 12802063 | 12813581 | + | mRNA | nonsense_mediated_decay |
| -295352 | enst00000639810 | sg00000284491 | thsd8-202 | 19 | 12802049 | 12804389 | + | mRNA | protein_coding |
| -295370 | enst00000643364 | sg00000284491 | thsd8-203 | 19 | 12802031 | 12806790 | + | lnc_RNA | processed_transcript |
| -295601 | enst00000301522 | sg00000167815 | prdx2-201 | 19 | 12796823 | 12801800 | - | mRNA | protein_coding |
| -295612 | enst00000466174 | sg00000167815 | prdx2-203 | 19 | 12796823 | 12801789 | - | lnc_RNA | retained_intron |
| -295613 | enst00000477555 | sg00000167815 | prdx2-204 | 19 | 12799916 | 12801788 | - | lnc_RNA | retained_intron |
| -295614 | enst00000334482 | sg00000167815 | prdx2-202 | 19 | 12796820 | 12801787 | - | mRNA | protein_coding |
| -296940 | enst00000478908 | sg00000167815 | prdx2-205 | 19 | 12799862 | 12800461 | - | lnc_RNA | retained_intron |
| -297154 | enst00000498785 | sg00000167815 | prdx2-206 | 19 | 12799556 | 12800247 | - | lnc_RNA | retained_intron |
| -300578 | enst00000585496 | sg00000267062 | ac018761.2-201 | 19 | 12796823 | 12801849 | + | lnc_RNA | lncrna |
| -304819 | enst00000593143 | sg00000095066 | hook2-224 | 19 | 12774502 | 12792582 | - | lnc_RNA | retained_intron |
| -305915 | enst00000302754 | sg00000171223 | junb-201 | 19 | 12791486 | 12793315 | + | mRNA | protein_coding |
| -310273 | enst00000585074 | sg00000263800 | mir5684-201 | 19 | 12787128 | 12787192 | + | miRNA | mirna |
| -312300 | enst00000590065 | sg00000267212 | ac018761.3-201 | 19 | 12784539 | 12785101 | - | lnc_RNA | lncrna |
| -318944 | enst00000592079 | sg00000095066 | hook2-220 | 19 | 12770937 | 12778457 | - | mRNA | protein_coding |
| -318955 | enst00000591641 | sg00000095066 | hook2-218 | 19 | 12774336 | 12778446 | - | lnc_RNA | retained_intron |
| -318981 | enst00000590839 | sg00000095066 | hook2-216 | 19 | 12771229 | 12778420 | - | mRNA | protein_coding |
| -318982 | enst00000586719 | sg00000095066 | hook2-206 | 19 | 12771277 | 12778419 | - | mRNA | nonsense_mediated_decay |
| -318989 | enst00000589400 | sg00000095066 | hook2-212 | 19 | 12769956 | 12778412 | - | mRNA | protein_coding |
| -318992 | enst00000592512 | sg00000095066 | hook2-222 | 19 | 12774535 | 12778409 | - | lnc_RNA | retained_intron |
| -319009 | enst00000591251 | sg00000095066 | hook2-217 | 19 | 12773973 | 12778392 | - | lnc_RNA | retained_intron |
| -321781 | enst00000264827 | sg00000095066 | hook2-201 | 19 | 12763004 | 12775620 | - | mRNA | protein_coding |
| -321829 | enst00000592808 | sg00000095066 | hook2-223 | 19 | 12773952 | 12775572 | - | lnc_RNA | retained_intron |
| -321831 | enst00000587178 | sg00000095066 | hook2-207 | 19 | 12772190 | 12775570 | - | mRNA | protein_coding |
| -321857 | enst00000589134 | sg00000095066 | hook2-210 | 19 | 12774078 | 12775544 | - | lnc_RNA | retained_intron |
| -321862 | enst00000586284 | sg00000095066 | hook2-204 | 19 | 12771229 | 12775539 | - | lnc_RNA | retained_intron |
| -321868 | enst00000589965 | sg00000095066 | hook2-215 | 19 | 12765167 | 12775533 | - | lnc_RNA | processed_transcript |
| -321878 | enst00000397668 | sg00000095066 | hook2-202 | 19 | 12763003 | 12775523 | - | mRNA | protein_coding |
| -324148 | enst00000588052 | sg00000095066 | hook2-209 | 19 | 12771395 | 12773253 | - | mRNA | protein_coding |
| -324583 | enst00000586188 | sg00000095066 | hook2-203 | 19 | 12763759 | 12772818 | - | mRNA | nonsense_mediated_decay |
| -324721 | enst00000587964 | sg00000095066 | hook2-208 | 19 | 12771817 | 12772680 | - | lnc_RNA | processed_transcript |
| -329317 | enst00000589398 | sg00000095066 | hook2-211 | 19 | 12765793 | 12768084 | - | lnc_RNA | retained_intron |
| -330787 | enst00000591839 | sg00000095066 | hook2-219 | 19 | 12765657 | 12766614 | - | lnc_RNA | retained_intron |
| -330878 | enst00000592259 | sg00000095066 | hook2-221 | 19 | 12764348 | 12766523 | - | lnc_RNA | retained_intron |
| -332037 | enst00000586710 | sg00000095066 | hook2-205 | 19 | 12763701 | 12765364 | - | lnc_RNA | retained_intron |
| -333679 | enst00000589915 | sg00000095066 | hook2-214 | 19 | 12763363 | 12763722 | - | lnc_RNA | retained_intron |
| -341542 | enst00000552539 | sg00000039987 | best2-203 | 19 | 12755859 | 12756706 | + | mRNA | protein_coding |
| -344808 | enst00000042931 | sg00000039987 | best2-201 | 19 | 12752593 | 12758455 | + | mRNA | protein_coding |
| -345610 | enst00000553030 | sg00000039987 | best2-204 | 19 | 12751791 | 12758458 | + | mRNA | protein_coding |
| -345699 | enst00000549706 | sg00000039987 | best2-202 | 19 | 12751702 | 12758406 | + | mRNA | protein_coding |
| -359904 | enst00000590633 | sg00000198356 | get3-202 | 19 | 12737497 | 12745650 | + | lnc_RNA | retained_intron |
| -359904 | enst00000357332 | sg00000198356 | get3-201 | 19 | 12737497 | 12748323 | + | mRNA | protein_coding |
| -360262 | enst00000591090 | sg00000198356 | get3-203 | 19 | 12737139 | 12748323 | + | mRNA | protein_coding |
| -362717 | enst00000242784 | sg00000123144 | trir-201 | 19 | 12730640 | 12734684 | - | mRNA | protein_coding |
| -362730 | enst00000588213 | sg00000123144 | trir-202 | 19 | 12730642 | 12734671 | - | mRNA | protein_coding |
| -362735 | enst00000592273 | sg00000123144 | trir-205 | 19 | 12730640 | 12734666 | - | mRNA | protein_coding |
| -362744 | enst00000591254 | sg00000123144 | trir-204 | 19 | 12730640 | 12734657 | - | mRNA | nonsense_mediated_decay |
| -365548 | enst00000589590 | sg00000123144 | trir-203 | 19 | 12730649 | 12731853 | - | lnc_RNA | retained_intron |
| -371515 | enst00000591596 | sg00000267004 | ac018761.1-201 | 19 | 12725517 | 12725886 | - | lnc_RNA | lncrna |
| -373390 | enst00000588216 | sg00000105576 | tnpo2-210 | 19 | 12701327 | 12724011 | - | mRNA | protein_coding |
| -373405 | enst00000425528 | sg00000105576 | tnpo2-202 | 19 | 12699194 | 12723996 | - | mRNA | protein_coding |
| -373469 | enst00000589337 | sg00000105576 | tnpo2-214 | 19 | 12719098 | 12723932 | - | mRNA | protein_coding |
| -373788 | enst00000590781 | sg00000105576 | tnpo2-217 | 19 | 12719267 | 12723613 | - | mRNA | protein_coding |
| -374829 | enst00000592287 | sg00000105576 | tnpo2-218 | 19 | 12701153 | 12722572 | - | mRNA | protein_coding |
| -374861 | enst00000589956 | sg00000105576 | tnpo2-216 | 19 | 12710743 | 12722540 | - | lnc_RNA | processed_transcript |
| -374864 | enst00000587654 | sg00000105576 | tnpo2-208 | 19 | 12715441 | 12722537 | - | mRNA | nonsense_mediated_decay |
| -374876 | enst00000585886 | sg00000105576 | tnpo2-204 | 19 | 12702828 | 12722525 | - | mRNA | non_stop_decay |
| -375046 | enst00000356861 | sg00000105576 | tnpo2-201 | 19 | 12699201 | 12722355 | - | mRNA | protein_coding |
| -375114 | enst00000586775 | sg00000105576 | tnpo2-205 | 19 | 12714904 | 12722287 | - | mRNA | nonsense_mediated_decay |
| -375686 | enst00000450764 | sg00000105576 | tnpo2-203 | 19 | 12699673 | 12721715 | - | mRNA | protein_coding |
| -378114 | enst00000588484 | sg00000105576 | tnpo2-211 | 19 | 12715198 | 12719287 | - | lnc_RNA | retained_intron |
| -382135 | enst00000588151 | sg00000105576 | tnpo2-209 | 19 | 12711243 | 12715266 | - | lnc_RNA | retained_intron |
| -390727 | enst00000588491 | sg00000105576 | tnpo2-212 | 19 | 12703758 | 12706674 | - | mRNA | nonsense_mediated_decay |
| -390883 | enst00000386967 | sg00000209702 | snord41-201 | 19 | 12706449 | 12706518 | - | snoRNA | snorna |
| -391119 | enst00000589572 | sg00000105576 | tnpo2-215 | 19 | 12703757 | 12706282 | - | mRNA | nonsense_mediated_decay |
| -391911 | enst00000587068 | sg00000105576 | tnpo2-206 | 19 | 12703676 | 12705490 | - | lnc_RNA | retained_intron |
| -394351 | enst00000587155 | sg00000105576 | tnpo2-207 | 19 | 12701599 | 12703050 | - | lnc_RNA | retained_intron |
| -394556 | enst00000589149 | sg00000105576 | tnpo2-213 | 19 | 12701054 | 12702845 | - | mRNA | protein_coding |
| -400770 | enst00000393261 | sg00000132004 | fbxw9-201 | 19 | 12688916 | 12696631 | - | mRNA | protein_coding |
| -400782 | enst00000587296 | sg00000132004 | fbxw9-202 | 19 | 12688053 | 12696619 | - | mRNA | nonsense_mediated_decay |
| -400820 | enst00000587955 | sg00000132004 | fbxw9-203 | 19 | 12689216 | 12696581 | - | mRNA | protein_coding |
| 406087 | enst00000593160 | sg00000141837 | cacna1a-212 | 19 | 13333640 | 13505939 | - | lnc_RNA | retained_intron |
| 406190 | enst00000637981 | sg00000141837 | cacna1a-256 | 19 | 13370791 | 13506042 | - | lnc_RNA | retained_intron |
| 406225 | enst00000637966 | sg00000141837 | cacna1a-255 | 19 | 13306564 | 13506077 | - | lnc_RNA | processed_transcript |
| 406260 | enst00000636966 | sg00000141837 | cacna1a-232 | 19 | 13362051 | 13506112 | - | lnc_RNA | retained_intron |
| 406372 | enst00000635727 | sg00000141837 | cacna1a-215 | 19 | 13207301 | 13506224 | - | mRNA | protein_coding |
| 406372 | enst00000636012 | sg00000141837 | cacna1a-221 | 19 | 13207301 | 13506224 | - | mRNA | protein_coding |
| 406372 | enst00000614285 | sg00000141837 | cacna1a-214 | 19 | 13206442 | 13506224 | - | mRNA | protein_coding |
| 406372 | enst00000636549 | sg00000141837 | cacna1a-227 | 19 | 13208046 | 13506224 | - | mRNA | protein_coding |
| 406372 | enst00000637276 | sg00000141837 | cacna1a-238 | 19 | 13207661 | 13506224 | - | mRNA | protein_coding |
| 406380 | enst00000637616 | sg00000141837 | cacna1a-243 | 19 | 13450342 | 13506232 | - | lnc_RNA | retained_intron |
| 406403 | enst00000573710 | sg00000141837 | cacna1a-202 | 19 | 13207302 | 13506255 | - | mRNA | protein_coding |
| 406403 | enst00000637927 | sg00000141837 | cacna1a-253 | 19 | 13208019 | 13506255 | - | mRNA | protein_coding |
| 406420 | enst00000636389 | sg00000141837 | cacna1a-225 | 19 | 13206740 | 13506272 | - | mRNA | protein_coding |
| 406607 | enst00000637736 | sg00000141837 | cacna1a-246 | 19 | 13206591 | 13506459 | - | mRNA | protein_coding |
| 406608 | enst00000638029 | sg00000141837 | cacna1a-258 | 19 | 13207274 | 13506460 | - | mRNA | protein_coding |
| 406608 | enst00000637432 | sg00000141837 | cacna1a-240 | 19 | 13207274 | 13506460 | - | mRNA | protein_coding |
| 406627 | enst00000360228 | sg00000141837 | cacna1a-201 | 19 | 13206442 | 13506479 | - | mRNA | protein_coding |
| 406627 | enst00000638009 | sg00000141837 | cacna1a-257 | 19 | 13206442 | 13506479 | - | mRNA | protein_coding |
| 406628 | enst00000637769 | sg00000141837 | cacna1a-247 | 19 | 13206445 | 13506480 | - | mRNA | protein_coding |
| 406643 | enst00000635895 | sg00000141837 | cacna1a-218 | 19 | 13206446 | 13506495 | - | mRNA | protein_coding |
| -408479 | enst00000585742 | sg00000267791 | ac018761.4-201 | 19 | 12688922 | 12689238 | + | lnc_RNA | lncrna |
| -409352 | enst00000640117 | sg00000283980 | gng14-201 | 19 | 12688049 | 12688372 | + | mRNA | protein_coding |
| -409403 | enst00000640151 | sg00000283980 | gng14-202 | 19 | 12687998 | 12688422 | + | mRNA | protein_coding |
| -410122 | enst00000593554 | sg00000268945 | ac010422.2-201 | 19 | 12682693 | 12687279 | - | lnc_RNA | lncrna |
| -415521 | enst00000210060 | sg00000095059 | dhps-201 | 19 | 12675717 | 12681880 | - | mRNA | protein_coding |
| -415533 | enst00000595912 | sg00000095059 | dhps-210 | 19 | 12677168 | 12681868 | - | mRNA | nonsense_mediated_decay |
| -415541 | enst00000601537 | sg00000095059 | dhps-221 | 19 | 12675762 | 12681860 | - | mRNA | nonsense_mediated_decay |
| -415548 | enst00000593473 | sg00000095059 | dhps-206 | 19 | 12679944 | 12681853 | - | lnc_RNA | retained_intron |
| -415563 | enst00000595100 | sg00000095059 | dhps-208 | 19 | 12679694 | 12681838 | - | mRNA | nonsense_mediated_decay |
| -415567 | enst00000648033 | sg00000285589 | ac010422.8-201 | 19 | 12668071 | 12681834 | - | mRNA | nonsense_mediated_decay |
| -415594 | enst00000601639 | sg00000095059 | dhps-222 | 19 | 12675734 | 12681807 | - | mRNA | nonsense_mediated_decay |
| -415630 | enst00000351660 | sg00000095059 | dhps-202 | 19 | 12675722 | 12681771 | - | mRNA | protein_coding |
| -415630 | enst00000614126 | sg00000095059 | dhps-223 | 19 | 12675832 | 12681771 | - | mRNA | protein_coding |
| -415838 | enst00000598850 | sg00000095059 | dhps-215 | 19 | 12677303 | 12681563 | - | mRNA | nonsense_mediated_decay |
| -415988 | enst00000596162 | sg00000095059 | dhps-211 | 19 | 12677328 | 12681413 | - | mRNA | protein_coding |
| -416069 | enst00000597152 | sg00000095059 | dhps-213 | 19 | 12677291 | 12681332 | - | mRNA | protein_coding |
| -416190 | enst00000593423 | sg00000095059 | dhps-204 | 19 | 12679657 | 12681211 | - | mRNA | nonsense_mediated_decay |
| -416195 | enst00000594424 | sg00000095059 | dhps-207 | 19 | 12675743 | 12681206 | - | mRNA | protein_coding |
| -416240 | enst00000599481 | sg00000095059 | dhps-216 | 19 | 12679625 | 12681161 | - | lnc_RNA | processed_transcript |
| -417120 | enst00000600451 | sg00000095059 | dhps-217 | 19 | 12677271 | 12680281 | - | mRNA | nonsense_mediated_decay |
| -417181 | enst00000595844 | sg00000095059 | dhps-209 | 19 | 12676775 | 12680220 | - | lnc_RNA | retained_intron |
| -417224 | enst00000593432 | sg00000095059 | dhps-205 | 19 | 12679462 | 12680177 | - | lnc_RNA | retained_intron |
| -417371 | enst00000596847 | sg00000095059 | dhps-212 | 19 | 12677165 | 12680030 | - | lnc_RNA | retained_intron |
| -417487 | enst00000593400 | sg00000095059 | dhps-203 | 19 | 12677090 | 12679914 | - | lnc_RNA | retained_intron |
| -417861 | enst00000600864 | sg00000095059 | dhps-220 | 19 | 12675722 | 12679540 | - | mRNA | protein_coding |
| -417881 | enst00000598246 | sg00000095059 | dhps-214 | 19 | 12675717 | 12679520 | - | mRNA | protein_coding |
| 420457 | enst00000587451 | sg00000141837 | cacna1a-208 | 19 | 13518975 | 13520309 | - | lnc_RNA | processed_transcript |
| -420483 | enst00000600510 | sg00000095059 | dhps-218 | 19 | 12675751 | 12676918 | - | lnc_RNA | retained_intron |
| -421329 | enst00000600639 | sg00000095059 | dhps-219 | 19 | 12675721 | 12676072 | - | mRNA | protein_coding |
| -425128 | enst00000552700 | sg00000123154 | wdr83-210 | 19 | 12672273 | 12675564 | + | lnc_RNA | retained_intron |
| -426378 | enst00000600694 | sg00000285583 | ac010422.7-201 | 19 | 12670079 | 12671023 | - | lnc_RNA | lncrna |
| -427153 | enst00000547797 | sg00000123154 | wdr83-206 | 19 | 12670248 | 12675561 | + | mRNA | protein_coding |
| -427392 | enst00000425834 | sg00000123154 | wdr83-202 | 19 | 12670009 | 12675810 | + | mRNA | nonsense_mediated_decay |
| -427632 | enst00000551329 | sg00000123154 | wdr83-209 | 19 | 12669769 | 12672878 | + | lnc_RNA | retained_intron |
| -427643 | enst00000550939 | sg00000123154 | wdr83-208 | 19 | 12669758 | 12670766 | + | lnc_RNA | retained_intron |
| -427646 | enst00000547481 | sg00000123154 | wdr83-205 | 19 | 12669755 | 12673268 | + | mRNA | nonsense_mediated_decay |
| -427848 | enst00000547255 | sg00000123154 | wdr83-204 | 19 | 12669553 | 12673305 | + | lnc_RNA | retained_intron |
| -427986 | enst00000596731 | sg00000105583 | wdr83os-202 | 19 | 12668073 | 12669415 | - | mRNA | protein_coding |
| -427998 | enst00000222190 | sg00000105583 | wdr83os-201 | 19 | 12668075 | 12669403 | - | mRNA | protein_coding |
| -428000 | enst00000598732 | sg00000105583 | wdr83os-203 | 19 | 12668145 | 12669401 | - | mRNA | protein_coding |
| -428004 | enst00000597961 | sg00000269590 | ac010422.5-201 | 19 | 12664828 | 12669397 | - | mRNA | protein_coding |
| -430571 | enst00000553179 | sg00000123154 | wdr83-211 | 19 | 12666830 | 12673211 | + | mRNA | nonsense_mediated_decay |
| -430587 | enst00000548381 | sg00000123154 | wdr83-207 | 19 | 12666814 | 12675831 | + | mRNA | nonsense_mediated_decay |
| -430594 | enst00000418543 | sg00000123154 | wdr83-201 | 19 | 12666807 | 12675832 | + | mRNA | protein_coding |
| -430599 | enst00000546754 | sg00000123154 | wdr83-203 | 19 | 12666802 | 12675791 | + | lnc_RNA | retained_intron |
| -430659 | enst00000600281 | sg00000104774 | man2b1-217 | 19 | 12665246 | 12666742 | - | lnc_RNA | retained_intron |
| -430659 | enst00000596512 | sg00000104774 | man2b1-214 | 19 | 12664804 | 12666742 | - | lnc_RNA | processed_transcript |
| -430659 | enst00000486847 | sg00000104774 | man2b1-209 | 19 | 12663435 | 12666742 | - | mRNA | protein_coding |
| -430659 | enst00000456935 | sg00000104774 | man2b1-203 | 19 | 12646512 | 12666742 | - | mRNA | protein_coding |
| -430665 | enst00000598876 | sg00000104774 | man2b1-216 | 19 | 12664933 | 12666736 | - | mRNA | protein_coding |
| -430667 | enst00000221363 | sg00000104774 | man2b1-201 | 19 | 12646516 | 12666734 | - | mRNA | protein_coding |
| -430718 | enst00000466794 | sg00000104774 | man2b1-206 | 19 | 12646561 | 12666683 | - | lnc_RNA | retained_intron |
| -433983 | enst00000462144 | sg00000104774 | man2b1-204 | 19 | 12660897 | 12663418 | - | lnc_RNA | retained_intron |
| -438391 | enst00000495617 | sg00000104774 | man2b1-211 | 19 | 12656659 | 12659010 | - | lnc_RNA | processed_transcript |
| -438784 | enst00000465830 | sg00000104774 | man2b1-205 | 19 | 12657455 | 12658617 | - | lnc_RNA | retained_intron |
| -439927 | enst00000593686 | sg00000104774 | man2b1-212 | 19 | 12652255 | 12657474 | - | mRNA | nonsense_mediated_decay |
| -440022 | enst00000595880 | sg00000104774 | man2b1-213 | 19 | 12652199 | 12657379 | - | lnc_RNA | processed_transcript |
| -440166 | enst00000433513 | sg00000104774 | man2b1-202 | 19 | 12652245 | 12657235 | - | lnc_RNA | processed_transcript |
| -440823 | enst00000596591 | sg00000104774 | man2b1-215 | 19 | 12652192 | 12656578 | - | mRNA | nonsense_mediated_decay |
| -449004 | enst00000597692 | sg00000269242 | ac010422.3-201 | 19 | 12643831 | 12648397 | - | mRNA | nonsense_mediated_decay |
| -449728 | enst00000493218 | sg00000104774 | man2b1-210 | 19 | 12646513 | 12647673 | - | lnc_RNA | retained_intron |
| -449817 | enst00000469423 | sg00000104774 | man2b1-207 | 19 | 12646511 | 12647584 | - | lnc_RNA | retained_intron |
| -450255 | enst00000480851 | sg00000104774 | man2b1-208 | 19 | 12646513 | 12647146 | - | lnc_RNA | processed_transcript |
| -453482 | enst00000325000 | sg00000178464 | rpl10p16-201 | 19 | 12643275 | 12643919 | - | pseudogenic_transcript | processed_pseudogene |
| -457303 | enst00000465656 | sg00000188033 | znf490-204 | 19 | 12583485 | 12640098 | - | lnc_RNA | processed_transcript |
| -486443 | enst00000498389 | sg00000173875 | znf791-203 | 19 | 12610958 | 12612394 | + | lnc_RNA | processed_transcript |
| -486447 | enst00000600752 | sg00000173875 | znf791-206 | 19 | 12610954 | 12628106 | + | mRNA | protein_coding |
| -486481 | enst00000598225 | sg00000173875 | znf791-205 | 19 | 12610920 | 12627982 | + | mRNA | nonsense_mediated_decay |
| -486481 | enst00000597691 | sg00000173875 | znf791-204 | 19 | 12610920 | 12627805 | + | mRNA | nonsense_mediated_decay |
| -486481 | enst00000343325 | sg00000173875 | znf791-201 | 19 | 12610920 | 12633834 | + | mRNA | protein_coding |
| -486483 | enst00000446165 | sg00000173875 | znf791-202 | 19 | 12610918 | 12633840 | + | mRNA | protein_coding |
| -486588 | enst00000311437 | sg00000188033 | znf490-201 | 19 | 12576100 | 12610813 | - | mRNA | protein_coding |
| -486598 | enst00000414906 | sg00000188033 | znf490-202 | 19 | 12581307 | 12610803 | - | mRNA | nonsense_mediated_decay |
Source file: /hps/research1/birney/users/adrien/analyses/cancer_DNA_promethion/run_1_2_3_4/DNA_pipeline_2/results/methylation/pycometh_meth_comp_CGI_3/out.tsv.gz
MD5 hash: 9aa0e3f69cb4e12345c3758eb68a5efc