PycoQC report

Generated on 16/12/20 with pycoQC 2.5.0.23

General run summary

Basecall summary

Alignment summary

Basecalled reads length

Aligned reads length

Basecalled reads PHRED quality

Aligned reads identity

Basecalled reads length vs reads PHRED quality

Basecalled reads length vs alignments length

Aligned reads length vs alignments identity

Reads PHRED quality vs alignments identity

Output over experiment time

Read length over experiment time

Read quality over experiment time

Aligned reads length over experiment time

Aligned reads identity over experiment time

Channel activity over time

Summary of reads alignment

Bases alignment rate

Coverage overview

Source summary files

/home/aleg/Programming/Packages/pycoQC/docs/pycoQC/large_data/sample_1_sequencing_summary.txt

Source bam files

/home/aleg/Programming/Packages/pycoQC/docs/pycoQC/large_data/sample_1.bam